RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 MRGPRX3Q96LB0 322 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 FAM129BQ96TA1 746 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 CMKLR1Q99788 373 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 BOCQ9BWV1 1114 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 ERVW-1Q9UQF0 538 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 KIF3AQ9Y496 699 aa9.9□□□□□ -0.82
SMARCAL1-213ENST00000496037 ITIH6Q6UXX5 1313 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 A0A1W2PQU0 124 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 TYW5A2RUC4 315 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 TTLL8A6PVC2 850 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 C1QTNF3-AMACRE9PGA6 284 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 SLC26A4O43511 780 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 MOCS3O95396 460 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 STAU1O95793 577 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 RPLP0P05388 317 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 SLFN14P0C7P3 912 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 LIFP15018 202 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 ATICP31939 592 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 NNMTP40261 264 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 KIF11P52732 1056 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 METAP1P53582 386 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 CLDN2P57739 230 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 CDH18Q13634 790 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 ME3Q16798 604 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 MPP7Q5T2T1 576 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 ADGRF1Q5T601 910 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 AGBL4Q5VU57 503 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 NUGGCQ68CJ6 796 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 OR6B2Q6IFH4 312 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 GCNT7Q6ZNI0 430 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 Q6ZSR6 202 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 ABI3BPQ7Z7G0 1075 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 CBWD2Q8IUF1 395 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 SLC34A3Q8N130 599 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 CPT1CQ8TCG5 803 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 APOBEC4Q8WW27 367 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 RAD54LQ92698 747 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 NOX5Q96PH1 765 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 SPAG5Q96R06 1193 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 CPEB1Q9BZB8 566 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 TBC1D7Q9P0N9 293 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 IPO11Q9UI26 975 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 PADI4Q9UM07 663 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 TP53TG5Q9Y2B4 290 aa9.89□□□□□ -0.83
SMARCAL1-213ENST00000496037 A0A1B0GTL3 188 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 C9orf172C9J069 976 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 HHLA1C9JL84 531 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 EPB41L2O43491 1005 aaKnown RBP9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 STX6O43752 255 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 KIF20AO95235 890 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 LATS1O95835 1130 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 PRKAR1AP10644 381 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 ETV5P41161 510 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 UBA7P41226 1012 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 TOB1P50616 345 aaPredicted RBP9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 SGSHP51688 502 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 MYL6P60660 151 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 ECT2LQ008S8 904 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 CNTN1Q12860 1018 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 ALCAMQ13740 583 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 FZD2Q14332 565 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 TRIP4Q15650 581 aaPredicted RBP9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 ZNF699Q32M78 642 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 C4orf48Q5BLP8 95 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 ZNF667Q5HYK9 610 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 SDR16C5Q8N3Y7 309 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 BTN2A2Q8WVV5 523 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 OR8D1Q8WZ84 308 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 LARP4BQ92615 738 aaKnown RBP9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 CCDC74AQ96AQ1 378 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 CDK15Q96Q40 435 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 STRA6Q9BX79 667 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 BLOC1S4Q9NUP1 217 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 PPP4R2Q9NY27 417 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 AKAP7Q9P0M2 348 aaPredicted RBP9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 STIM2Q9P246 746 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 SPASTQ9UBP0 616 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 GGT7Q9UJ14 662 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 STOML2Q9UJZ1 356 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 PHTF1Q9UMS5 762 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 MED13Q9UHV7 2174 aa9.88□□□□□ -0.83
SMARCAL1-213ENST00000496037 TDRD6O60522 2096 aaKnown RBP9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 SPTY2D1-AS1A0A0U1RR47 76 aa9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 CAPN5O15484 640 aaPredicted RBP9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 HNRNPRO43390 633 aaKnown RBP9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 PHACTR2O75167 634 aa9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 ANXA6P08133 673 aa9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 P4HA1P13674 534 aa9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 GAP43P17677 238 aa9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 CTSOP43234 321 aaPredicted RBP9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 YWHAGP61981 247 aaKnown RBP eCLIP9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 CCL7P80098 99 aa9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 PITRM1Q5JRX3 1037 aa9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 ALG1LQ6GMV1 187 aa9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 NEK5Q6P3R8 708 aa9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 KYAT3Q6YP21 454 aaKnown RBP9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 TIPARPQ7Z3E1 657 aaKnown RBP9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 HORMAD1Q86X24 394 aa9.87□□□□□ -0.83
SMARCAL1-213ENST00000496037 C12orf29Q8N999 325 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms