RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 NBL1P41271 181 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 CDKN2BP42772 138 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 PEX5P50542 639 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 METAP1P53582 386 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 GEMIN4P57678 1058 aaKnown RBP19.79■□□□□ 0.76
HDAC4-212ENST00000495497 DYNLT1P63172 113 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 SLC10A2Q12908 348 aaPredicted RBP19.79■□□□□ 0.76
HDAC4-212ENST00000495497 LPAL2Q16609 132 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 ATXN7L2Q5T6C5 722 aaPredicted RBP19.79■□□□□ 0.76
HDAC4-212ENST00000495497 KAZNQ674X7 775 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 NPNTQ6UXI9 565 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 DPY19L3Q6ZPD9 716 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 PRR23BQ6ZRT6 265 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 CEP68Q76N32 757 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 PEX26Q7Z412 305 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 SYCE1Q8N0S2 351 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 PLD5Q8N7P1 536 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 OR8D1Q8WZ84 308 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 CEP44Q9C0F1 390 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 FBRSQ9HAH7 460 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 SP110Q9HB58 689 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 SARDHQ9UL12 918 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.79■□□□□ 0.76
HDAC4-212ENST00000495497 CKAP5Q14008 2032 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 CHD5Q8TDI0 1954 aa19.79■□□□□ 0.76
HDAC4-212ENST00000495497 MUC6Q6W4X9 2439 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 CXorf51AA0A1B0GTR3 108 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 MCF2LO15068 1137 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 MID1O15344 667 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 RNASEH1O60930 286 aaKnown RBP19.78■□□□□ 0.76
HDAC4-212ENST00000495497 ZRANB2O95218 330 aaKnown RBP eCLIP19.78■□□□□ 0.76
HDAC4-212ENST00000495497 IL1BP01584 269 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 DNTTP04053 509 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 CTSLP07711 333 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 IL10RBQ08334 325 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 ADCY2Q08462 1091 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 SIM2Q14190 667 aaPredicted RBP19.78■□□□□ 0.76
HDAC4-212ENST00000495497 ELAVL3Q14576 367 aaKnown RBP19.78■□□□□ 0.76
HDAC4-212ENST00000495497 CST6Q15828 149 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 POM121L1PQ3SYA9 428 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 CARD16Q5EG05 197 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 SLC9A4Q6AI14 798 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 AADACL2Q6P093 401 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 ZNF662Q6ZS27 426 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 FAM124AQ86V42 546 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 KBTBD6Q86V97 674 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 CCDC50Q8IVM0 306 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 RCOR2Q8IZ40 523 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 PCDH20Q8N6Y1 951 aaKnown RBP19.78■□□□□ 0.76
HDAC4-212ENST00000495497 OR6K2Q8NGY2 324 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 EXD1Q8NHP7 514 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.78■□□□□ 0.76
HDAC4-212ENST00000495497 ALG3Q92685 438 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 ITM2CQ9NQX7 267 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 ARIH1Q9Y4X5 557 aaPredicted RBP19.78■□□□□ 0.76
HDAC4-212ENST00000495497 USP34Q70CQ2 3546 aa19.78■□□□□ 0.76
HDAC4-212ENST00000495497 IGHV1OR15-9A0A0B4J2B8 117 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 CCDC66A2RUB6 948 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 ZNF487B1APH4 448 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 PLK4O00444 970 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 APOL1O14791 398 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 DDX3YO15523 660 aaKnown RBP19.77■□□□□ 0.76
HDAC4-212ENST00000495497 MAFKO60675 156 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 GKP32189 559 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 CHRNA3P32297 505 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 CNR2P34972 360 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 TPMTP51580 245 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 TAZQ16635 292 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 INO80DQ53TQ3 878 aaPredicted RBP19.77■□□□□ 0.76
HDAC4-212ENST00000495497 METTL3Q86U44 580 aaKnown RBP19.77■□□□□ 0.76
HDAC4-212ENST00000495497 VSIG1Q86XK7 387 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 RYBPQ8N488 228 aaPredicted RBP19.77■□□□□ 0.76
HDAC4-212ENST00000495497 ATPAF2Q8N5M1 289 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 DEFB119Q8N690 84 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 ISG20Q96AZ6 181 aaKnown RBP19.77■□□□□ 0.76
HDAC4-212ENST00000495497 EXOC2Q96KP1 924 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 DTLQ9NZJ0 730 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 USP36Q9P275 1121 aaKnown RBP19.77■□□□□ 0.76
HDAC4-212ENST00000495497 HECAQ9UBI9 543 aaPredicted RBP19.77■□□□□ 0.76
HDAC4-212ENST00000495497 LHX3Q9UBR4 397 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 SERGEFQ9UGK8 458 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 PPM1HQ9ULR3 514 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 HEY1Q9Y5J3 304 aa19.77■□□□□ 0.76
HDAC4-212ENST00000495497 NUP205Q92621 2012 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 NYNRINQ9P2P1 1898 aaKnown RBP19.76■□□□□ 0.75
HDAC4-212ENST00000495497 hCG_1818297A0A087WSY0 165 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 ZNF217O75362 1048 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 PEX11BO96011 259 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 SLC8A1P32418 973 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 RECQLP46063 649 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-212ENST00000495497 CCNHP51946 323 aaPredicted RBP19.76■□□□□ 0.75
HDAC4-212ENST00000495497 RWDD2BP57060 319 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 RHOAP61586 193 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 CCDC173Q0VFZ6 552 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 GALNT2Q10471 571 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 ARSIQ5FYB1 569 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 PIP4K2CQ8TBX8 421 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 GRIN3AQ8TCU5 1115 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 GANCQ8TET4 914 aa19.76■□□□□ 0.75
HDAC4-212ENST00000495497 CASKIN2Q8WXE0 1202 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms