RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 FSHRP23945 695 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 CCT5P48643 541 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 CLCN5P51795 746 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 NDST2P52849 883 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 NTHL1P78549 312 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 HTR4Q13639 388 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 DDR2Q16832 855 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 ANO4Q32M45 955 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 FAXCQ5TGI0 409 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 TTC39BQ5VTQ0 682 aaPredicted RBP16.59■□□□□ 0.25
CBX4-204ENST00000495122 AFMIDQ63HM1 303 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 TPGS2Q68CL5 300 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 RGS9BPQ6ZS82 235 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 PID1Q7Z2X4 250 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 CPLX4Q7Z7G2 160 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 LINC00523Q86TU6 105 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 IGDCC3Q8IVU1 814 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 TAB3Q8N5C8 712 aaPredicted RBP16.59■□□□□ 0.25
CBX4-204ENST00000495122 ATPAF2Q8N5M1 289 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 NPWQ8N729 165 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 RTL3Q8N8U3 475 aaKnown RBP16.59■□□□□ 0.25
CBX4-204ENST00000495122 BTN2A3PQ96KV6 586 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 FCRL2Q96LA5 508 aaPredicted RBP16.59■□□□□ 0.25
CBX4-204ENST00000495122 TEKT5Q96M29 485 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 PLCD4Q9BRC7 762 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 LRRC40Q9H9A6 602 aa16.59■□□□□ 0.25
CBX4-204ENST00000495122 HBS1LQ9Y450 684 aaKnown RBP16.59■□□□□ 0.25
CBX4-204ENST00000495122 FAM159BA6NKW6 160 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 CACNG3O60359 315 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 KRT38O76015 456 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 IGLV3-27P01718 113 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 SRFP11831 508 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 PSMB4P28070 264 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 NPY2RP49146 381 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 SEC24CP53992 1094 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 SPARCL1Q14515 664 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 KBTBD12Q3ZCT8 623 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 HP1BP3Q5SSJ5 553 aaPredicted RBP16.58■□□□□ 0.24
CBX4-204ENST00000495122 SNX30Q5VWJ9 437 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 UNC5AQ6ZN44 842 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 CCDC117Q8IWD4 279 aaPredicted RBP16.58■□□□□ 0.24
CBX4-204ENST00000495122 UMODL1-AS1Q8N2C9 162 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 SLC44A3Q8N4M1 653 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 DENND1AQ8TEH3 1009 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 MZB1Q8WU39 189 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 CDKL2Q92772 493 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 GRAMD1AQ96CP6 724 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 FAM86C1Q9NVL1 165 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 MKS1Q9NXB0 559 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 SEPT10Q9P0V9 454 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 GMIPQ9P107 970 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 AFF4Q9UHB7 1163 aaKnown RBP16.58■□□□□ 0.24
CBX4-204ENST00000495122 RSPH14Q9UHP6 348 aa16.58■□□□□ 0.24
CBX4-204ENST00000495122 AAR2Q9Y312 384 aaKnown RBP16.58■□□□□ 0.24
CBX4-204ENST00000495122 ZFP37Q9Y6Q3 630 aaPredicted RBP16.58■□□□□ 0.24
CBX4-204ENST00000495122 CACNA1IQ9P0X4 2223 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 GREB1Q4ZG55 1949 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 IGLV3-10A0A075B6K4 115 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 E9PAM4 449 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 MATN3O15232 486 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 TYROBPO43914 113 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 XYLBO75191 536 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 ANXA9O76027 345 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 C1QAP02745 245 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 SNRPAP09012 282 aaKnown RBP16.57■□□□□ 0.24
CBX4-204ENST00000495122 AOC1P19801 751 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 MGAT5BQ3V5L5 792 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 SPANXN3Q5MJ09 141 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 KCTD11Q693B1 232 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 NAPEPLDQ6IQ20 393 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 RWDD4Q6NW29 188 aaKnown RBP16.57■□□□□ 0.24
CBX4-204ENST00000495122 KLHDC10Q6PID8 442 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 CAPN12Q6ZSI9 719 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 MARK2Q7KZI7 788 aaKnown RBP16.57■□□□□ 0.24
CBX4-204ENST00000495122 RTL10Q7L3V2 364 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 CACNA2D3Q8IZS8 1091 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 SIX5Q8N196 739 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 PDCD7Q8N8D1 485 aaKnown RBP16.57■□□□□ 0.24
CBX4-204ENST00000495122 ATAD1Q8NBU5 361 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 FLCNQ8NFG4 579 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 CFAP36Q96G28 342 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 IL12RB2Q99665 862 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 PRMT1Q99873 361 aaKnown RBP16.57■□□□□ 0.24
CBX4-204ENST00000495122 IRF2BPLQ9H1B7 796 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 CASS4Q9NQ75 786 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 TMEM248Q9NWD8 314 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 HCFC1R1Q9NWW0 138 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 MOCS1Q9NZB8 636 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 BFARQ9NZS9 450 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 SAMD15Q9P1V8 674 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 WNT16Q9UBV4 365 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 SFMBT1Q9UHJ3 866 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 FBXL21Q9UKT6 434 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 CDH7Q9ULB5 785 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 HS3ST4Q9Y661 456 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 NUMBLQ9Y6R0 609 aa16.57■□□□□ 0.24
CBX4-204ENST00000495122 WDR27A2RRH5 827 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 KRBA1A5PL33 1030 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 SLC38A8A6NNN8 435 aa16.56■□□□□ 0.24
CBX4-204ENST00000495122 AVILO75366 819 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms