RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 HNRNPA2B1P22626 353 aaKnown RBP22.57■■□□□ 1.2
HDDC3-203ENST00000494993 ABCG1P45844 678 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 KCNMA1Q12791 1236 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 TAF3Q5VWG9 929 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 TRNP1Q6NT89 227 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 ERN2Q76MJ5 926 aaKnown RBP22.57■■□□□ 1.2
HDDC3-203ENST00000494993 BNIPLQ7Z465 357 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 SLC25A45Q8N413 288 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 GRIN3AQ8TCU5 1115 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 RFFLQ8WZ73 363 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 HDAC8Q9BY41 377 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 TNKS2Q9H2K2 1166 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 FZD3Q9NPG1 666 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 KLHL11Q9NVR0 708 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 ZNF212Q9UDV6 495 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 ZFR2Q9UPR6 939 aaKnown RBP22.57■■□□□ 1.2
HDDC3-203ENST00000494993 AK5Q9Y6K8 562 aa22.57■■□□□ 1.2
HDDC3-203ENST00000494993 PTPRQQ9UMZ3 2332 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 ILVBLA1L0T0 632 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 LSM8O95777 96 aaKnown RBP22.56■■□□□ 1.2
HDDC3-203ENST00000494993 DGKAP23743 735 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 AKT2P31751 481 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 RECQLP46063 649 aaPredicted RBP22.56■■□□□ 1.2
HDDC3-203ENST00000494993 ZNF211Q13398 564 aaPredicted RBP22.56■■□□□ 1.2
HDDC3-203ENST00000494993 RTP5Q14D33 572 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 C2CD6Q53TS8 623 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 HSP90AA4PQ58FG1 418 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 ARSIQ5FYB1 569 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 KLHDC7AQ5VTJ3 777 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 ZNF783Q6ZMS7 281 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 DPY19L3Q6ZPD9 716 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 CACTIN-AS1Q8N1I8 211 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 OR13H1Q8NG92 308 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 CRELD1Q96HD1 420 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 PPP1R16AQ96I34 528 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 BBC3Q96PG8 261 aaPredicted RBP22.56■■□□□ 1.2
HDDC3-203ENST00000494993 HAPLN3Q96S86 360 aa22.56■■□□□ 1.2
HDDC3-203ENST00000494993 NAA15Q9BXJ9 866 aaKnown RBP22.56■■□□□ 1.2
HDDC3-203ENST00000494993 GOLGA8SH3BPF8 625 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 TLX3O43711 291 aaPredicted RBP22.55■■□□□ 1.2
HDDC3-203ENST00000494993 SRGAP2O75044 1071 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 ZNF821O75541 412 aaPredicted RBP22.55■■□□□ 1.2
HDDC3-203ENST00000494993 LEFTY1O75610 366 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 PCDH8O95206 1070 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 SEMG2Q02383 582 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 DPCR1Q3MIW9 517 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 RETSATQ6NUM9 610 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 GCNT7Q6ZNI0 430 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 NOP9Q86U38 636 aaKnown RBP22.55■■□□□ 1.2
HDDC3-203ENST00000494993 MSANTD4Q8NCY6 345 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 OR4C6Q8NH72 309 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 CFAP57Q96MR6 1250 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 SPON2Q9BUD6 331 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 CALN1Q9BXU9 219 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 ZYG11BQ9C0D3 744 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 CEP44Q9C0F1 390 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 CLSTN2Q9H4D0 955 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 UCKL1Q9NWZ5 548 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 TMEM59LQ9UK28 342 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 WASF2Q9Y6W5 498 aa22.55■■□□□ 1.2
HDDC3-203ENST00000494993 PES1O00541 588 aaKnown RBP22.54■■□□□ 1.2
HDDC3-203ENST00000494993 ZMPSTE24O75844 475 aa22.54■■□□□ 1.2
HDDC3-203ENST00000494993 ENDOD1O94919 500 aa22.54■■□□□ 1.2
HDDC3-203ENST00000494993 ERCC5P28715 1186 aaPredicted RBP22.54■■□□□ 1.2
HDDC3-203ENST00000494993 SERPINH1P50454 418 aaKnown RBP22.54■■□□□ 1.2
HDDC3-203ENST00000494993 NEK3P51956 506 aa22.54■■□□□ 1.2
HDDC3-203ENST00000494993 NOMO3P69849 1222 aa22.54■■□□□ 1.2
HDDC3-203ENST00000494993 DAB2P98082 770 aa22.54■■□□□ 1.2
HDDC3-203ENST00000494993 INSM1Q01101 510 aaPredicted RBP22.54■■□□□ 1.2
HDDC3-203ENST00000494993 TMEM259Q4ZIN3 620 aa22.54■■□□□ 1.2
HDDC3-203ENST00000494993 HS1BP3Q53T59 392 aa22.54■■□□□ 1.2
HDDC3-203ENST00000494993 SEL1L3Q68CR1 1132 aa22.54■■□□□ 1.2
HDDC3-203ENST00000494993 ABI3BPQ7Z7G0 1075 aa22.54■■□□□ 1.2
HDDC3-203ENST00000494993 FAM131BQ86XD5 332 aa22.54■■□□□ 1.2
HDDC3-203ENST00000494993 PCDH20Q8N6Y1 951 aaKnown RBP22.54■■□□□ 1.2
HDDC3-203ENST00000494993 ATP13A1Q9HD20 1204 aa22.54■■□□□ 1.2
HDDC3-203ENST00000494993 CLCA2Q9UQC9 943 aa22.54■■□□□ 1.2
HDDC3-203ENST00000494993 PIAS2O75928 621 aa22.53■■□□□ 1.2
HDDC3-203ENST00000494993 MMEP08473 750 aa22.53■■□□□ 1.2
HDDC3-203ENST00000494993 UCHL3P15374 230 aa22.53■■□□□ 1.2
HDDC3-203ENST00000494993 EIF2S3P41091 472 aaKnown RBP22.53■■□□□ 1.2
HDDC3-203ENST00000494993 CLDN2P57739 230 aa22.53■■□□□ 1.2
HDDC3-203ENST00000494993 ARF5P84085 180 aa22.53■■□□□ 1.2
HDDC3-203ENST00000494993 E2F1Q01094 437 aa22.53■■□□□ 1.2
HDDC3-203ENST00000494993 GNA12Q03113 381 aa22.53■■□□□ 1.2
HDDC3-203ENST00000494993 SLC20A2Q08357 652 aa22.53■■□□□ 1.2
HDDC3-203ENST00000494993 ARCQ7LC44 396 aa22.53■■□□□ 1.2
HDDC3-203ENST00000494993 DCBLD1Q8N8Z6 715 aa22.53■■□□□ 1.2
HDDC3-203ENST00000494993 EPS8L1Q8TE68 723 aa22.53■■□□□ 1.2
HDDC3-203ENST00000494993 CPA5Q8WXQ8 436 aa22.53■■□□□ 1.2
HDDC3-203ENST00000494993 PPARGC1AQ9UBK2 798 aaKnown RBP22.53■■□□□ 1.2
HDDC3-203ENST00000494993 DACH1Q9UI36 760 aa22.53■■□□□ 1.2
HDDC3-203ENST00000494993 BPTFQ12830 3046 aa22.52■■□□□ 1.2
HDDC3-203ENST00000494993 F8VZ95 297 aa22.52■■□□□ 1.2
HDDC3-203ENST00000494993 FFAR2O15552 330 aa22.52■■□□□ 1.2
HDDC3-203ENST00000494993 GIMD1P0DJR0 217 aa22.52■■□□□ 1.2
HDDC3-203ENST00000494993 ADRB3P13945 408 aa22.52■■□□□ 1.2
HDDC3-203ENST00000494993 ITGB7P26010 798 aa22.52■■□□□ 1.2
HDDC3-203ENST00000494993 ITPKBP27987 946 aa22.52■■□□□ 1.2
HDDC3-203ENST00000494993 NAA35Q5VZE5 725 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms