RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 HOXC13P31276 330 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 SERPINB6P35237 376 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 ITKQ08881 620 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 GRM3Q14832 879 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 PCLAFQ15004 111 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 CNGA3Q16281 694 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 FASTKD1Q53R41 847 aaKnown RBP10.57□□□□□ -0.72
SAMM50-206ENST00000494795 C4orf22Q6V702 233 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 ASRGL1Q7L266 308 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 DCP1BQ8IZD4 617 aaKnown RBP10.57□□□□□ -0.72
SAMM50-206ENST00000494795 BHMTQ93088 406 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 ALKBH8Q96BT7 664 aaKnown RBP10.57□□□□□ -0.72
SAMM50-206ENST00000494795 KLHL29Q96CT2 875 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 IL12RB2Q99665 862 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 TSEN34Q9BSV6 310 aaKnown RBP10.57□□□□□ -0.72
SAMM50-206ENST00000494795 RNF208Q9H0X6 261 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 ACTR5Q9H9F9 607 aaPredicted RBP10.57□□□□□ -0.72
SAMM50-206ENST00000494795 MARCH2Q9P0N8 246 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 TLR6Q9Y2C9 796 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 DOCK4Q8N1I0 1966 aa10.57□□□□□ -0.72
SAMM50-206ENST00000494795 MATN3O15232 486 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 TBC1D4O60343 1298 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 DNAJB2P25686 324 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 TYK2P29597 1187 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 CRHR1P34998 444 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 TRIM60Q495X7 471 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 PDZD4Q76G19 769 aaPredicted RBP10.56□□□□□ -0.72
SAMM50-206ENST00000494795 SCML4Q8N228 414 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 E2F7Q96AV8 911 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 C8orf48Q96LL4 319 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 SHCBP1LQ9BZQ2 653 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 NMUR2Q9GZQ4 415 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 HIPK3Q9H422 1215 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 LRRC40Q9H9A6 602 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 PRDM5Q9NQX1 630 aaPredicted RBP10.56□□□□□ -0.72
SAMM50-206ENST00000494795 SIRPGQ9P1W8 387 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 ZNF212Q9UDV6 495 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 L3MBTL1Q9Y468 752 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 USH1CQ9Y6N9 552 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 DOCK6Q96HP0 2047 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.56□□□□□ -0.72
SAMM50-206ENST00000494795 TLR5O60602 858 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 FKTNO75072 461 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 AHSGP02765 367 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 BPGMP07738 259 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 MMP2P08253 660 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 FGF3P11487 239 aaPredicted RBP10.56□□□□□ -0.72
SAMM50-206ENST00000494795 CCNCP24863 283 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 CD86P42081 329 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 RPS24P62847 133 aaKnown RBP10.56□□□□□ -0.72
SAMM50-206ENST00000494795 SEPT6Q14141 434 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 BRMS1LQ5PSV4 323 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 AFMIDQ63HM1 303 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 MAVSQ7Z434 540 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 CLNKQ7Z7G1 428 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 CHSY1Q86X52 802 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 CEP97Q8IW35 865 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 EXOC2Q96KP1 924 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 PPP1R36Q96LQ0 422 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 SERPINB11Q96P15 392 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 TBL1YQ9BQ87 522 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 SLC39A10Q9ULF5 831 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 NCAM2O15394 837 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 PLIN3O60664 434 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 KLKB1P03952 638 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 PRSS56P0CW18 603 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 NQO1P15559 274 aaKnown RBP10.56□□□□□ -0.72
SAMM50-206ENST00000494795 APLP1P51693 650 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 OCRLQ01968 901 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 TLE2Q04725 743 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 RPS27LQ71UM5 84 aaKnown RBP10.56□□□□□ -0.72
SAMM50-206ENST00000494795 RPRD1AQ96P16 312 aaPredicted RBP10.56□□□□□ -0.72
SAMM50-206ENST00000494795 RBBP8Q99708 897 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 MIPEPQ99797 713 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 RNF38Q9H0F5 515 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 SUDS3Q9H7L9 328 aaPredicted RBP10.56□□□□□ -0.72
SAMM50-206ENST00000494795 PNPOQ9NVS9 261 aa10.56□□□□□ -0.72
SAMM50-206ENST00000494795 C2orf78A6NCI8 922 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 GRXCR2A6NFK2 248 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 TK2O00142 265 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 CACNG3O60359 315 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 USP1O94782 785 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 UNC5CO95185 931 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 ARSAP15289 507 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 ADRA1AP35348 466 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 GPR17Q13304 367 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 NFE2Q16621 373 aaPredicted RBP10.55□□□□□ -0.72
SAMM50-206ENST00000494795 FNDC1Q4ZHG4 1894 aaPredicted RBP10.55□□□□□ -0.72
SAMM50-206ENST00000494795 MBLAC2Q68D91 279 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 TREML1Q86YW5 311 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 SLC41A1Q8IVJ1 513 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 SLAIN1Q8ND83 568 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 FAM136AQ96C01 138 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 NDNQ99608 321 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 BAIAP2L1Q9UHR4 511 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 SYN3O14994 580 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 RPLP2P05387 115 aaKnown RBP10.55□□□□□ -0.72
SAMM50-206ENST00000494795 SBK3P0C264 359 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 IRF1P10914 325 aa10.55□□□□□ -0.72
SAMM50-206ENST00000494795 GM2AP17900 193 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms