RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 ADAMTS16Q8TE57 1224 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 STYXQ8WUJ0 223 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 CAAP1Q9H8G2 361 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 PLGRKTQ9HBL7 147 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 INIPQ9NRY2 104 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 FZD10Q9ULW2 581 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 KANSL1LA0AUZ9 987 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 PRORSD1PA6NEY8 169 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 EPHX2P34913 555 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 PHKA2P46019 1235 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 NAGLUP54802 743 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 PSME3P61289 254 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 FAM160B1Q5W0V3 765 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 KCTD11Q693B1 232 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 SLC26A9Q7LBE3 791 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 CROCCP3Q8IVE0 287 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 CENPLQ8N0S6 344 aaPredicted RBP15.6■□□□□ 0.09
SDF4-207ENST00000494748 DNERQ8NFT8 737 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 TOP1MTQ969P6 601 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 VPS39Q96JC1 886 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 CXCL16Q9H2A7 254 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 LRRC40Q9H9A6 602 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 ZNF277Q9NRM2 450 aaPredicted RBP15.6■□□□□ 0.09
SDF4-207ENST00000494748 VTI1BQ9UEU0 232 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 SH3GLB1Q9Y371 365 aa15.6■□□□□ 0.09
SDF4-207ENST00000494748 PDCD11Q14690 1871 aaKnown RBP15.59■□□□□ 0.09
SDF4-207ENST00000494748 SOCS2O14508 198 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 CBX3Q13185 183 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 CHSY3Q70JA7 882 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 ACOT1Q86TX2 421 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 PCDH20Q8N6Y1 951 aaKnown RBP15.59■□□□□ 0.09
SDF4-207ENST00000494748 TRPC4APQ8TEL6 797 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 TFAP2CQ92754 450 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 RMND5BQ96G75 393 aaPredicted RBP15.59■□□□□ 0.09
SDF4-207ENST00000494748 GPR78Q96P69 363 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 CIB1Q99828 191 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 CASS4Q9NQ75 786 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 CNOT6Q9ULM6 557 aaKnown RBP15.59■□□□□ 0.09
SDF4-207ENST00000494748 SLC35E2BP0CK96 405 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 EDNRBP24530 442 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 RPL34P49207 117 aaKnown RBP15.59■□□□□ 0.09
SDF4-207ENST00000494748 GRM3Q14832 879 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 HERC6Q8IVU3 1022 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 AGBL3Q8NEM8 1001 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 C12orf42Q96LP6 360 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 GPR22Q99680 433 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 C20orf96Q9NUD7 363 aaPredicted RBP15.59■□□□□ 0.09
SDF4-207ENST00000494748 GAS2O43903 313 aaKnown RBP15.59■□□□□ 0.09
SDF4-207ENST00000494748 DLX3O60479 287 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 PEX10O60683 326 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 CABYRO75952 493 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 HMGCS2P54868 508 aa15.59■□□□□ 0.09
SDF4-207ENST00000494748 PCNTO95613 3336 aa15.58■□□□□ 0.09
SDF4-207ENST00000494748 GNAO1P09471 354 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 INHBBP09529 407 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 SETSIPP0DME0 302 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 PTPRAP18433 802 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 LPGAT1Q92604 370 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 C12orf43Q96C57 262 aaKnown RBP15.58■□□□□ 0.08
SDF4-207ENST00000494748 PRDM12Q9H4Q4 367 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 CACNA2D2Q9NY47 1150 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 VANGL2Q9ULK5 521 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 HCRTO43612 131 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 ARIH2O95376 493 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 HDCP19113 662 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 SLC7A1P30825 629 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 CSE1LP55060 971 aaKnown RBP15.58■□□□□ 0.08
SDF4-207ENST00000494748 RALGDSQ12967 914 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 LY6KQ17RY6 165 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 ZDHHC17Q8IUH5 632 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 SEPT1Q8WYJ6 367 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 UNC93B1Q9H1C4 597 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 OSBPL2Q9H1P3 480 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 FAM124BQ9H5Z6 455 aaPredicted RBP15.58■□□□□ 0.08
SDF4-207ENST00000494748 ASB7Q9H672 318 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 TASP1Q9H6P5 420 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 CLK4Q9HAZ1 481 aaKnown RBP15.58■□□□□ 0.08
SDF4-207ENST00000494748 MYOZ2Q9NPC6 264 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 SLC38A7Q9NVC3 462 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 GMPR2Q9P2T1 348 aaKnown RBP15.58■□□□□ 0.08
SDF4-207ENST00000494748 SLC8A2Q9UPR5 921 aa15.58■□□□□ 0.08
SDF4-207ENST00000494748 TRIM64BA6NI03 449 aa15.57■□□□□ 0.08
SDF4-207ENST00000494748 ZNF701M0R085 212 aaPredicted RBP15.57■□□□□ 0.08
SDF4-207ENST00000494748 FOXD2O60548 495 aaPredicted RBP15.57■□□□□ 0.08
SDF4-207ENST00000494748 AP2A1O95782 977 aa15.57■□□□□ 0.08
SDF4-207ENST00000494748 PHEXP78562 749 aa15.57■□□□□ 0.08
SDF4-207ENST00000494748 MPP3Q13368 585 aa15.57■□□□□ 0.08
SDF4-207ENST00000494748 PDAP1Q13442 181 aaKnown RBP15.57■□□□□ 0.08
SDF4-207ENST00000494748 CERCAMQ5T4B2 595 aa15.57■□□□□ 0.08
SDF4-207ENST00000494748 ITPRIPL1Q6GPH6 555 aa15.57■□□□□ 0.08
SDF4-207ENST00000494748 PPP4R4Q6NUP7 873 aa15.57■□□□□ 0.08
SDF4-207ENST00000494748 CATSPERGQ6ZRH7 1159 aa15.57■□□□□ 0.08
SDF4-207ENST00000494748 LYSMD3Q7Z3D4 306 aa15.57■□□□□ 0.08
SDF4-207ENST00000494748 MFSD6LQ8IWD5 586 aa15.57■□□□□ 0.08
SDF4-207ENST00000494748 ANKFN1Q8N957 763 aa15.57■□□□□ 0.08
SDF4-207ENST00000494748 APBA2Q99767 749 aa15.57■□□□□ 0.08
SDF4-207ENST00000494748 MLPHQ9BV36 600 aaPredicted RBP15.57■□□□□ 0.08
SDF4-207ENST00000494748 NOL11Q9H8H0 719 aaKnown RBP15.57■□□□□ 0.08
SDF4-207ENST00000494748 TMEM165Q9HC07 324 aa15.57■□□□□ 0.08
SDF4-207ENST00000494748 TNFRSF12AQ9NP84 129 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms