RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 MID1O15344 667 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 RPP40O75818 363 aaKnown RBP11.33□□□□□ -0.6
APTX-230ENST00000494649 ZRANB2O95218 330 aaKnown RBP eCLIP11.33□□□□□ -0.6
APTX-230ENST00000494649 CTSLP07711 333 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 ACADMP11310 421 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 CTNNA1P35221 906 aaKnown RBP11.33□□□□□ -0.6
APTX-230ENST00000494649 CDKN2BP42772 138 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 NUBP1P53384 320 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 NRLP54845 237 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 NHLH1Q02575 133 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 IFI16Q16666 785 aaKnown RBP11.33□□□□□ -0.6
APTX-230ENST00000494649 LRRC38Q5VT99 294 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 AFMIDQ63HM1 303 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 SPOCD1Q6ZMY3 1216 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 CEP68Q76N32 757 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 ATPAF2Q8N5M1 289 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 PLD5Q8N7P1 536 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 ZBTB44Q8NCP5 570 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 FAM129BQ96TA1 746 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 HERPUD2Q9BSE4 406 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 ZDHHC6Q9H6R6 413 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 DDX56Q9NY93 547 aaKnown RBP11.33□□□□□ -0.6
APTX-230ENST00000494649 RCOR3Q9P2K3 495 aaPredicted RBP11.33□□□□□ -0.6
APTX-230ENST00000494649 UBA2Q9UBT2 640 aaPredicted RBP11.33□□□□□ -0.6
APTX-230ENST00000494649 AMFRQ9UKV5 643 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.33□□□□□ -0.6
APTX-230ENST00000494649 EML5Q05BV3 1969 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 CKAP5Q14008 2032 aa11.33□□□□□ -0.6
APTX-230ENST00000494649 A0A1W2PP55 124 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 APOL1O14791 398 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 CST8O60676 142 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 SERPINB6P35237 376 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 ZNF135P52742 658 aaPredicted RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 RHOAP61586 193 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 RPS14P62263 151 aaKnown RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 SLC10A7Q0GE19 358 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 CCDC173Q0VFZ6 552 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 SIM2Q14190 667 aaPredicted RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 ZNF528Q3MIS6 628 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 WDR5BQ86VZ2 330 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 KATNAL2Q8IYT4 538 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 TSEN2Q8NCE0 465 aaKnown RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 CCNYQ8ND76 341 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 FAF2Q96CS3 445 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 LGMNQ99538 433 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 CEP41Q9BYV8 373 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 PDFQ9HBH1 243 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 TTLL3Q9Y4R7 772 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 PCDHA3Q9Y5H8 950 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 CHD5Q8TDI0 1954 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 PRR23AA6NEV1 266 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 KPNA3O00505 521 aaPredicted RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 KRIT1O00522 736 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 MAFKO60675 156 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 PRAMEF11O60813 436 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 RNASEH2AO75792 299 aaKnown RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 DNTTP04053 509 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 PYGMP11217 842 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 PECAM1P16284 738 aaPredicted RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 RECQLP46063 649 aaPredicted RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 RGRP47804 291 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 TPMTP51580 245 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 CCNHP51946 323 aaPredicted RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 MAXP61244 160 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 ELAVL3Q14576 367 aaKnown RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 CYTH1Q15438 398 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 CST6Q15828 149 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 USP39Q53GS9 565 aaKnown RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 ARSIQ5FYB1 569 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 ZNF776Q68DI1 518 aaPredicted RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 KBTBD6Q86V97 674 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 TMEFF1Q8IYR6 380 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 SYCE1Q8N0S2 351 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 C17orf53Q8N3J3 647 aaPredicted RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 NELL1Q92832 810 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 ZNF419Q96HQ0 510 aaPredicted RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 RSPH9Q9H1X1 276 aaPredicted RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 RETREG1Q9H6L5 497 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 DONSONQ9NYP3 566 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 DTLQ9NZJ0 730 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 HECAQ9UBI9 543 aaPredicted RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 EVLQ9UI08 416 aaPredicted RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 ARIH1Q9Y4X5 557 aaPredicted RBP11.32□□□□□ -0.6
APTX-230ENST00000494649 PCDHGA2Q9Y5H1 932 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 LAMA1P25391 3075 aa11.32□□□□□ -0.6
APTX-230ENST00000494649 NUMA1Q14980 2115 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 ABCA7Q8IZY2 2146 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 SHROOM3Q8TF72 1996 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 MUSKO15146 869 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 INSIG1O15503 277 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 MAP3K13O43283 966 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 RNASEH1O60930 286 aaKnown RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 LEFTY1O75610 366 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 SLC8A1P32418 973 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 PEX5P50542 639 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 RWDD2BP57060 319 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 PAFAH1B3Q15102 231 aaKnown RBP11.31□□□□□ -0.6
APTX-230ENST00000494649 CCDC6Q16204 474 aa11.31□□□□□ -0.6
APTX-230ENST00000494649 TFDP3Q5H9I0 405 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms