RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 RPL9P32969 192 aaKnown RBP5.57□□□□□ -1.52
PTCD3-219ENST00000494323 NPTX2P47972 431 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 PXNP49023 591 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-219ENST00000494323 RRADP55042 308 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 RHDQ02161 417 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 CD69Q07108 199 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 ANKRD1Q15327 319 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 CCDC6Q16204 474 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 ST3GAL2Q16842 350 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 XKR4Q5GH76 650 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 STXBP5Q5T5C0 1151 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 TPGS2Q68CL5 300 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 LAIR1Q6GTX8 287 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 USP30Q70CQ3 517 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 GPR155Q7Z3F1 870 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 KBTBD2Q8IY47 623 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 YAF2Q8IY57 180 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 GRAMD1CQ8IYS0 662 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 ELMOD1Q8N336 334 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 GLB1L3Q8NCI6 653 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-219ENST00000494323 NSUN7Q8NE18 718 aaKnown RBP5.57□□□□□ -1.52
PTCD3-219ENST00000494323 CSGALNACT1Q8TDX6 532 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 KIFAP3Q92845 792 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 DNASE1L2Q92874 299 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 GCDHQ92947 438 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-219ENST00000494323 GTF3C6Q969F1 213 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 TTC17Q96AE7 1141 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 SLC7A6OSQ96CW6 309 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-219ENST00000494323 ZFYVE19Q96K21 471 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 LRRC3BQ96PB8 259 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 PGLYRP2Q96PD5 576 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 ADI1Q9BV57 179 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 CCDC94Q9BW85 323 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-219ENST00000494323 CDT1Q9H211 546 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 PTPRHQ9HD43 1115 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 SEMA4GQ9NTN9 838 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 DDX19AQ9NUU7 478 aaKnown RBP5.57□□□□□ -1.52
PTCD3-219ENST00000494323 SLC38A7Q9NVC3 462 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 GTSE1Q9NYZ3 720 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 LRWD1Q9UFC0 647 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 RALYQ9UKM9 306 aaKnown RBP5.57□□□□□ -1.52
PTCD3-219ENST00000494323 SPAG17Q6Q759 2223 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 CHD6Q8TD26 2715 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 ABCA7Q8IZY2 2146 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 SLC30A4O14863 429 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 SYN3O14994 580 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 TMEM127O75204 238 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 TUSC2O75896 110 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 SOAT2O75908 522 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 VNN2O95498 520 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 ZBED1O96006 694 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 HRGP04196 525 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 LTA4HP09960 611 aaKnown RBP5.56□□□□□ -1.52
PTCD3-219ENST00000494323 KCNE1P15382 129 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 CCR3P51677 355 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 NEK3P51956 506 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 NFYCQ13952 458 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 PON2Q15165 354 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 SAFBQ15424 915 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTCD3-219ENST00000494323 SF3A2Q15428 464 aaKnown RBP5.56□□□□□ -1.52
PTCD3-219ENST00000494323 ZRSR1Q15695 479 aaKnown RBP5.56□□□□□ -1.52
PTCD3-219ENST00000494323 IL31Q6EBC2 164 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 RINT1Q6NUQ1 792 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 Q6ZS52 159 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 APBB1IPQ7Z5R6 666 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-219ENST00000494323 DNAJB7Q7Z6W7 309 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-219ENST00000494323 DENND1CQ8IV53 801 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 ARID3BQ8IVW6 561 aaPredicted RBP5.56□□□□□ -1.52
PTCD3-219ENST00000494323 DAW1Q8N136 415 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 SPEM1Q8N4L4 309 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 C4orf32Q8N8J7 132 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 PLA2G15Q8NCC3 412 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 APPL2Q8NEU8 664 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 OR2I1PQ8NGU4 316 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 NRG4Q8WWG1 115 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 C1GALT1C1Q96EU7 318 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 PLIN2Q99541 437 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 ARRDC1-AS1Q9H2J1 176 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 TRPV5Q9NQA5 729 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 KMT5AQ9NQR1 393 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 ASAH2Q9NR71 780 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 RXFP3Q9NSD7 469 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 TUBGCP4Q9UGJ1 667 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 AFF4Q9UHB7 1163 aaKnown RBP5.56□□□□□ -1.52
PTCD3-219ENST00000494323 USP25Q9UHP3 1055 aa5.56□□□□□ -1.52
PTCD3-219ENST00000494323 USP24Q9UPU5 2620 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 PP2D1A8MPX8 630 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 SPECC1L-ADORA2AF8WAN1 911 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 PMM2O15305 246 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 CHADO15335 359 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 ARHGAP6O43182 974 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 MTSS1O43312 755 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 B3GALT2O43825 422 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 EXTL3O43909 919 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 PHF2O75151 1096 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 OAZ2O95190 189 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 MCF2P10911 925 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 PROZP22891 400 aa5.55□□□□□ -1.52
PTCD3-219ENST00000494323 MATR3P43243 847 aaKnown RBP eCLIP5.55□□□□□ -1.52
PTCD3-219ENST00000494323 ALDH1A3P47895 512 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms