RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 NEK5Q6P3R8 708 aa13.7□□□□□ -0.22
CTDSP1-212ENST00000494067 TRIM72Q6ZMU5 477 aa13.7□□□□□ -0.22
CTDSP1-212ENST00000494067 TMPRSS7Q7RTY8 843 aa13.7□□□□□ -0.22
CTDSP1-212ENST00000494067 IQCHQ86VS3 1027 aa13.7□□□□□ -0.22
CTDSP1-212ENST00000494067 TRIM69Q86WT6 500 aa13.7□□□□□ -0.22
CTDSP1-212ENST00000494067 OR2A12Q8NGT7 310 aa13.7□□□□□ -0.22
CTDSP1-212ENST00000494067 RXFP2Q8WXD0 754 aa13.7□□□□□ -0.22
CTDSP1-212ENST00000494067 ARRDC3Q96B67 414 aa13.7□□□□□ -0.22
CTDSP1-212ENST00000494067 SPON2Q9BUD6 331 aa13.7□□□□□ -0.22
CTDSP1-212ENST00000494067 ZYG11BQ9C0D3 744 aa13.7□□□□□ -0.22
CTDSP1-212ENST00000494067 ERVMER34-1Q9H9K5 563 aa13.7□□□□□ -0.22
CTDSP1-212ENST00000494067 TMEM63CQ9P1W3 806 aa13.7□□□□□ -0.22
CTDSP1-212ENST00000494067 RALYQ9UKM9 306 aaKnown RBP13.7□□□□□ -0.22
CTDSP1-212ENST00000494067 CA5BQ9Y2D0 317 aa13.7□□□□□ -0.22
CTDSP1-212ENST00000494067 CACNA1BQ00975 2339 aa13.7□□□□□ -0.22
CTDSP1-212ENST00000494067 FREM2Q5SZK8 3169 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 COL5A1P20908 1838 aaPredicted RBP13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 IGF2RP11717 2491 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 TCRBV5S1A1TA0A578 114 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 ILVBLA1L0T0 632 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 C2CD4BA6NLJ0 364 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 CBX4O00257 560 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 DKK1O94907 266 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 DESP17661 470 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 CDK11BP21127 795 aaKnown RBP13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 SDC4P31431 198 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 NXPH1P58417 271 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 ARF5P84085 180 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 MYL5Q02045 173 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 CDO1Q16878 200 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 HS1BP3Q53T59 392 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 PIP5KL1Q5T9C9 394 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 GATAD2AQ86YP4 633 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 CCDC185Q8N715 623 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 TMIEQ8NEW7 156 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 TNKS2Q9H2K2 1166 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 ATP13A1Q9HD20 1204 aa13.69□□□□□ -0.22
CTDSP1-212ENST00000494067 ENC1O14682 589 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 TEX33O43247 280 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 ACVRL1P37023 503 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 DNA2P51530 1060 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 HDAC4P56524 1084 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 GEMIN4P57678 1058 aaKnown RBP13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 STX1AQ16623 288 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 CLEC16AQ2KHT3 1053 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 MON1BQ7L1V2 547 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 NLRP14Q86W24 1093 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 PROSER1Q86XN7 944 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 SPATS2Q86XZ4 545 aaKnown RBP13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 AOPEPQ8N6M6 819 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 NEK11Q8NG66 645 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 SAP25Q8TEE9 199 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 KLHDC7BQ96G42 594 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 CNDP2Q96KP4 475 aaKnown RBP13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 SELENOOQ9BVL4 669 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 CEP44Q9C0F1 390 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 RETREG1Q9H6L5 497 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 ANO10Q9NW15 660 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 PPARGC1AQ9UBK2 798 aaKnown RBP13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 IL36AQ9UHA7 158 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 HPCAL4Q9UM19 191 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 PCDHGA1Q9Y5H4 931 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 LAMA5O15230 3695 aa13.68□□□□□ -0.22
CTDSP1-212ENST00000494067 ANKRD62A6NC57 917 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 LRRC10BA6NIK2 292 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 TAF4O00268 1085 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 PCDH8O95206 1070 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 C1SP09871 688 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 CCDC172P0C7W6 258 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 AKT2P31751 481 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 RFC1P35251 1148 aaPredicted RBP13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 HNF1BP35680 557 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 NSFP46459 744 aaKnown RBP13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 RXRGP48443 463 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 GSCP56915 257 aaPredicted RBP13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 GNA12Q03113 381 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 ARSIQ5FYB1 569 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 RWDD4Q6NW29 188 aaKnown RBP13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 C22orf39Q6P5X5 142 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 TMPRSS12Q86WS5 348 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 DNAAF5Q86Y56 855 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 DRC7Q8IY82 874 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 PYROXD2Q8N2H3 581 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 EID2Q8N6I1 236 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 PCDH20Q8N6Y1 951 aaKnown RBP13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 FAM174AQ8TBP5 190 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 CENPIQ92674 756 aaPredicted RBP13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 ERGIC2Q96RQ1 377 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 SYT11Q9BT88 431 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 OR12D3Q9UGF7 316 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 WASF2Q9Y6W5 498 aa13.67□□□□□ -0.22
CTDSP1-212ENST00000494067 CELSR3Q9NYQ7 3312 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 DMXL2Q8TDJ6 3036 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 KNL1Q8NG31 2342 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 RFPL3O75679 317 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 CALB1P05937 261 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 KRT3P12035 628 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 EPHA8P29322 1005 aaPredicted RBP13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 GKP32189 559 aa13.66□□□□□ -0.22
CTDSP1-212ENST00000494067 ADRA1BP35368 520 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms