RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 MTF2Q9Y483 593 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 ABCC10Q5T3U5 1492 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 A0A0A6YYK5 440 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 URADA6NGE7 173 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 PLOD2O00469 737 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 OR10H3O60404 316 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 KRT36O76013 467 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF806P0C7X5 589 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 GJA1P17302 382 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 UBA1P22314 1058 aaKnown RBP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 THPOP40225 353 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 PDK3Q15120 406 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 RFX4Q33E94 735 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 SETMARQ53H47 684 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF280DQ6N043 979 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 ARHGAP36Q6ZRI8 547 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 CHST15Q7LFX5 561 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 CHST13Q8NET6 341 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 TCP10LQ8TDR4 215 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 AKAP1Q92667 903 aaKnown RBP eCLIP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 EFHD2Q96C19 240 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 PTCD3Q96EY7 689 aaKnown RBP7.96□□□□□ -1.14
BRCA1-221ENST00000493795 SP140LQ9H930 580 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 PNPLA3Q9NST1 481 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 KCNK4Q9NYG8 393 aa7.96□□□□□ -1.14
BRCA1-221ENST00000493795 TRIM38O00635 465 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 CHST10O43529 356 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PRLRP16471 622 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 FMO4P31512 558 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 CDK9P50750 372 aaKnown RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF470Q6ECI4 717 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PAGE2Q7Z2X7 111 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 TMC7Q7Z402 723 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 RAB43Q86YS6 212 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 EFCAB3Q8N7B9 438 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PIH1D2Q8WWB5 315 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PYDC1Q8WXC3 89 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 ACOT12Q8WYK0 555 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 MARCH7Q9H992 704 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 SPEF1Q9Y4P9 236 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 THOC2Q8NI27 1593 aaKnown RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 A0A0G2JPF8 293 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 HNRNPCL3B7ZW38 293 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 DCXO43602 365 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 RAMP2O60895 175 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PROSCO94903 275 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 TOP3BO95985 862 aaKnown RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 HNRNPCL4P0DMR1 293 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 OGNP20774 298 aaKnown RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 WEE1P30291 646 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 ATXN1P54253 815 aaKnown RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PKNOX1P55347 436 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 SRSF11Q05519 484 aaKnown RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF543Q08ER8 600 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 ZBTB6Q15916 424 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 LLGL2Q6P1M3 1020 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 FAM81AQ8TBF8 368 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 ATL1Q8WXF7 558 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PMM1Q92871 262 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 CAVIN3Q969G5 261 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 BORCS5Q969J3 196 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 RNF31Q96EP0 1072 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 NUDT12Q9BQG2 462 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 TARS2Q9BW92 718 aaKnown RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PRRG4Q9BZD6 226 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 MED28Q9H204 178 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 CHMP1AQ9HD42 196 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 AASDHPPTQ9NRN7 309 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 LEF1Q9UJU2 399 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 TNFSF13BQ9Y275 285 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 CPDO75976 1380 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 ABHD14A-ACY1A0A1B0GW23 586 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 RIPK2O43353 540 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 SIN3BO75182 1162 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 CCNKO75909 580 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PROCP04070 461 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 HUNKP57058 714 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 OLR1P78380 273 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 BNIP2Q12982 314 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 CBX3Q13185 183 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 ORC1Q13415 861 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 MED22Q15528 200 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 BMT2Q1RMZ1 405 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 ZIK1Q3SY52 487 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 KYAT3Q6YP21 454 aaKnown RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PTCHD4Q6ZW05 846 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 UTS2BQ765I0 119 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 JAZF1Q86VZ6 243 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 DENND6BQ8NEG7 585 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 SELENOMQ8WWX9 145 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 TESCQ96BS2 214 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 SIPA1Q96FS4 1042 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 TEFMQ96QE5 360 aaKnown RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 NKIRAS2Q9NYR9 191 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 GNPTGQ9UJJ9 305 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 SNX7Q9UNH6 387 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 HBS1LQ9Y450 684 aaKnown RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 KDM5AP29375 1690 aaKnown RBP7.95□□□□□ -1.14
BRCA1-221ENST00000493795 ABCC2Q92887 1545 aa7.95□□□□□ -1.14
BRCA1-221ENST00000493795 PNPLA7Q6ZV29 1317 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms