RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 DOCK8Q8NF50 2099 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 HNRNPLP14866 589 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNX17-208ENST00000493711 CES1P23141 567 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 ACTN2P35609 894 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 SOX9P48436 509 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 STARD6P59095 220 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 IFI35P80217 286 aaPredicted RBP12.67□□□□□ -0.38
SNX17-208ENST00000493711 ZXDAP98168 799 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 GEN1Q17RS7 908 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 MARC1Q5VT66 337 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 ZC3H18Q86VM9 953 aaKnown RBP12.67□□□□□ -0.38
SNX17-208ENST00000493711 C1orf54Q8WWF1 131 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 HTR3CQ8WXA8 447 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 MAML1Q92585 1016 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 ISG20Q96AZ6 181 aaKnown RBP12.67□□□□□ -0.38
SNX17-208ENST00000493711 PPP1R2P1Q96PQ5 205 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 LGMNQ99538 433 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 AP1M1Q9BXS5 423 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 OSBPL6Q9BZF3 934 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 SEPT3Q9UH03 358 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 ERVW-1Q9UQF0 538 aa12.67□□□□□ -0.38
SNX17-208ENST00000493711 R3HDM2Q9Y2K5 976 aaKnown RBP12.67□□□□□ -0.38
SNX17-208ENST00000493711 WDFY4Q6ZS81 3184 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 CTAGE15A4D2H0 777 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 GAS8O95995 478 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 CTAGE8P0CG41 777 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 ALADP13716 330 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 CCNB1P14635 433 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 COILP38432 576 aaPredicted RBP12.66□□□□□ -0.38
SNX17-208ENST00000493711 MAPK8P45983 427 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 SERPINH1P50454 418 aaKnown RBP12.66□□□□□ -0.38
SNX17-208ENST00000493711 TUBB4BP68371 445 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 MRPS21P82921 87 aaKnown RBP12.66□□□□□ -0.38
SNX17-208ENST00000493711 ZNF235Q14590 738 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 LBRQ14739 615 aaKnown RBP12.66□□□□□ -0.38
SNX17-208ENST00000493711 PON2Q15165 354 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 OASLQ15646 514 aaKnown RBP12.66□□□□□ -0.38
SNX17-208ENST00000493711 RALGPS1Q5JS13 557 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 SDE2Q6IQ49 451 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 SYDE1Q6ZW31 735 aaPredicted RBP12.66□□□□□ -0.38
SNX17-208ENST00000493711 CTAGE6Q86UF2 777 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 CTAGE4Q8IX94 777 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 CCDC105Q8IYK2 499 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 ATP11CQ8NB49 1132 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 SPATA4Q8NEY3 305 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 CCHCR1Q8TD31 782 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 ATG4AQ8WYN0 398 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 SLCO2A1Q92959 643 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 RTP4Q96DX8 246 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 CCDC114Q96M63 670 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 L2HGDHQ9H9P8 463 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 PDFQ9HBH1 243 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 THAP10Q9P2Z0 257 aaPredicted RBP12.66□□□□□ -0.38
SNX17-208ENST00000493711 SUN2Q9UH99 717 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 MUTYHQ9UIF7 546 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 DNPEPQ9ULA0 475 aa12.66□□□□□ -0.38
SNX17-208ENST00000493711 KANSL1LA0AUZ9 987 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 C5orf60A6NFR6 353 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 PRRT4C9JH25 899 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 J3KR12 359 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 PDE2AO00408 941 aaPredicted RBP12.65□□□□□ -0.38
SNX17-208ENST00000493711 TRIM24O15164 1050 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 DCXO43602 365 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 ATP9BO43861 1147 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 SNAP91O60641 907 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 OPHN1O60890 802 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 MAP3K6O95382 1288 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 MMP13P45452 471 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 ARF5P84085 180 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 NSUN2Q08J23 767 aaKnown RBP eCLIP12.65□□□□□ -0.38
SNX17-208ENST00000493711 SNX1Q13596 522 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 DHX34Q14147 1143 aaKnown RBP12.65□□□□□ -0.38
SNX17-208ENST00000493711 FNDC3BQ53EP0 1204 aaKnown RBP12.65□□□□□ -0.38
SNX17-208ENST00000493711 TMEM215Q68D42 235 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 ITPRIPL1Q6GPH6 555 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 FSTL4Q6MZW2 842 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 CCDC137Q6PK04 289 aaKnown RBP12.65□□□□□ -0.38
SNX17-208ENST00000493711 TXNDC11Q6PKC3 985 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 GSTA5Q7RTV2 222 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 MAATS1Q7Z4T9 603 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 TP53INP2Q8IXH6 220 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 SIX5Q8N196 739 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 SH2D3CQ8N5H7 860 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 TEX26Q8N6G2 289 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 PCDH20Q8N6Y1 951 aaKnown RBP12.65□□□□□ -0.38
SNX17-208ENST00000493711 CCDC89Q8N998 374 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 EDAQ92838 391 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 PSKH2Q96QS6 385 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 IL12RB2Q99665 862 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 CINPQ9BW66 212 aaPredicted RBP12.65□□□□□ -0.38
SNX17-208ENST00000493711 SMARCAL1Q9NZC9 954 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 PCYOX1Q9UHG3 505 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 CA14Q9ULX7 337 aa12.65□□□□□ -0.38
SNX17-208ENST00000493711 KIF26AQ9ULI4 1882 aaPredicted RBP12.65□□□□□ -0.38
SNX17-208ENST00000493711 TARSL2A2RTX5 802 aaKnown RBP12.64□□□□□ -0.39
SNX17-208ENST00000493711 PRR33A8MZF0 331 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 K7EQS6 105 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 SGK1O00141 431 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 RNF103O00237 685 aa12.64□□□□□ -0.39
SNX17-208ENST00000493711 KCNN4O15554 427 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms