RNA–Protein interactions for RNA: ENST00000492638.1

RRP1-206, Transcript of ribosomal RNA processing 1, humanhuman

TSL 2

Gene RRP1, Length 1,017 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-206ENST00000492638 LSMEM2Q8N112 164 aa16.72■□□□□ 0.27
RRP1-206ENST00000492638 DCAF4L2Q8NA75 395 aa16.72■□□□□ 0.27
RRP1-206ENST00000492638 CHST14Q8NCH0 376 aa16.72■□□□□ 0.27
RRP1-206ENST00000492638 ZNF578Q96N58 590 aaPredicted RBP16.72■□□□□ 0.27
RRP1-206ENST00000492638 PSMB7Q99436 277 aa16.72■□□□□ 0.27
RRP1-206ENST00000492638 SPON2Q9BUD6 331 aa16.72■□□□□ 0.27
RRP1-206ENST00000492638 DUSP23Q9BVJ7 150 aa16.72■□□□□ 0.27
RRP1-206ENST00000492638 OSBPL2Q9H1P3 480 aa16.72■□□□□ 0.27
RRP1-206ENST00000492638 TNKS2Q9H2K2 1166 aa16.72■□□□□ 0.27
RRP1-206ENST00000492638 PIGVQ9NUD9 493 aa16.72■□□□□ 0.27
RRP1-206ENST00000492638 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.72■□□□□ 0.27
RRP1-206ENST00000492638 NLGN3Q9NZ94 848 aa16.72■□□□□ 0.27
RRP1-206ENST00000492638 IPO11Q9UI26 975 aaKnown RBP16.72■□□□□ 0.27
RRP1-206ENST00000492638 SMAD6O43541 496 aaKnown RBP16.71■□□□□ 0.27
RRP1-206ENST00000492638 USP12O75317 370 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 F9P00740 461 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 OR1E1P30953 314 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 NEK3P51956 506 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 HNRNPKP61978 463 aaKnown RBP eCLIP16.71■□□□□ 0.27
RRP1-206ENST00000492638 GABREP78334 506 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 APBA1Q02410 837 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 DEUP1Q05D60 604 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 C5orf22Q49AR2 442 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 TAF1BQ53T94 588 aaPredicted RBP16.71■□□□□ 0.27
RRP1-206ENST00000492638 RETSATQ6NUM9 610 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 C22orf39Q6P5X5 142 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 GCNT7Q6ZNI0 430 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 DCP2Q8IU60 420 aaKnown RBP16.71■□□□□ 0.27
RRP1-206ENST00000492638 FAM174AQ8TBP5 190 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 MAPK15Q8TD08 544 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 SHC3Q92529 594 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 IFT43Q96FT9 208 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 APOLD1Q96LR9 279 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 HDAC8Q9BY41 377 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 ARHGEF38Q9NXL2 777 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 MPP6Q9NZW5 540 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 SNX10Q9Y5X0 201 aa16.71■□□□□ 0.27
RRP1-206ENST00000492638 A0A0D9SEW6 157 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 H3BM21 787 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 SCAMP1O15126 338 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 SRGAP2O75044 1071 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 CSO75390 466 aaKnown RBP16.7■□□□□ 0.26
RRP1-206ENST00000492638 LEFTY1O75610 366 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 C1QL1O75973 258 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 GP1BAP07359 652 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 MYF5P13349 255 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 CXCR3P49682 368 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 UCNP55089 124 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 RPS21P63220 83 aaKnown RBP16.7■□□□□ 0.26
RRP1-206ENST00000492638 BECN1Q14457 450 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 PTPN20Q4JDL3 420 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 DPY19L3Q6ZPD9 716 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 ABI3BPQ7Z7G0 1075 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 ZNF397Q8NF99 534 aaPredicted RBP16.7■□□□□ 0.26
RRP1-206ENST00000492638 FEM1CQ96JP0 617 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 SLC17A9Q9BYT1 436 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 USP29Q9HBJ7 922 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 PLCB1Q9NQ66 1216 aa16.7■□□□□ 0.26
RRP1-206ENST00000492638 ZFR2Q9UPR6 939 aaKnown RBP16.7■□□□□ 0.26
RRP1-206ENST00000492638 NYNRINQ9P2P1 1898 aaKnown RBP16.69■□□□□ 0.26
RRP1-206ENST00000492638 CAPN8A6NHC0 703 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 K7ESM1 405 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 NEBLO76041 1014 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 MTIF2P46199 727 aaKnown RBP16.69■□□□□ 0.26
RRP1-206ENST00000492638 TMPRSS3P57727 454 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 SGCGQ13326 291 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 ACBD5Q5T8D3 534 aaPredicted RBP16.69■□□□□ 0.26
RRP1-206ENST00000492638 KIAA1161Q6NSJ0 714 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 SLC47A2Q86VL8 602 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 SLC22A18ASQ8N1D0 253 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 TMEM35BQ8NCS4 154 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 OR7D4Q8NG98 312 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 IFI44Q8TCB0 444 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 KCNE4Q8WWG9 221 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 NPY6RQ99463 290 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 POLR1BQ9H9Y6 1135 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 ATP13A1Q9HD20 1204 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 TMEM51Q9NW97 253 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 RWDD2AQ9UIY3 292 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 DNAJC12Q9UKB3 198 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 HS3ST3A1Q9Y663 406 aa16.69■□□□□ 0.26
RRP1-206ENST00000492638 CPED1A4D0V7 1026 aa16.68■□□□□ 0.26
RRP1-206ENST00000492638 DRGXA6NNA5 263 aa16.68■□□□□ 0.26
RRP1-206ENST00000492638 NEMP1O14524 444 aa16.68■□□□□ 0.26
RRP1-206ENST00000492638 FPGTO14772 594 aa16.68■□□□□ 0.26
RRP1-206ENST00000492638 PAK4O96013 591 aaPredicted RBP16.68■□□□□ 0.26
RRP1-206ENST00000492638 GIMD1P0DJR0 217 aa16.68■□□□□ 0.26
RRP1-206ENST00000492638 ADRB3P13945 408 aa16.68■□□□□ 0.26
RRP1-206ENST00000492638 TFE3P19532 575 aaPredicted RBP16.68■□□□□ 0.26
RRP1-206ENST00000492638 PON1P27169 355 aa16.68■□□□□ 0.26
RRP1-206ENST00000492638 LSSP48449 732 aa16.68■□□□□ 0.26
RRP1-206ENST00000492638 BPIFB4P59827 614 aa16.68■□□□□ 0.26
RRP1-206ENST00000492638 CFHR1Q03591 330 aa16.68■□□□□ 0.26
RRP1-206ENST00000492638 TPD52L1Q16890 204 aaPredicted RBP16.68■□□□□ 0.26
RRP1-206ENST00000492638 TMEM259Q4ZIN3 620 aa16.68■□□□□ 0.26
RRP1-206ENST00000492638 FAM102AQ5T9C2 384 aaPredicted RBP16.68■□□□□ 0.26
RRP1-206ENST00000492638 OTUD1Q5VV17 481 aaPredicted RBP16.68■□□□□ 0.26
RRP1-206ENST00000492638 CDCP2Q5VXM1 449 aa16.68■□□□□ 0.26
RRP1-206ENST00000492638 ZCCHC8Q6NZY4 707 aaKnown RBP16.68■□□□□ 0.26
RRP1-206ENST00000492638 KYAT3Q6YP21 454 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms