RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 IL21RQ9HBE5 538 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 ENTPD7Q9NQZ7 604 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 TUBA8Q9NY65 449 aaPredicted RBP4.21□□□□□ -1.74
VTA1-204ENST00000491881 HDAC6Q9UBN7 1215 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 ICKQ9UPZ9 632 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 TMEM98Q9Y2Y6 226 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 ZMYM2Q9UBW7 1377 aa4.21□□□□□ -1.74
VTA1-204ENST00000491881 FNDC1Q4ZHG4 1894 aaPredicted RBP4.21□□□□□ -1.74
VTA1-204ENST00000491881 C17orf100A8MU93 164 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 J3KRW8 73 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 TSPAN4O14817 238 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 PER2O15055 1255 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 EPB41L2O43491 1005 aaKnown RBP4.2□□□□□ -1.74
VTA1-204ENST00000491881 KIF1CO43896 1103 aaKnown RBP4.2□□□□□ -1.74
VTA1-204ENST00000491881 CNOT3O75175 753 aaKnown RBP4.2□□□□□ -1.74
VTA1-204ENST00000491881 WDHD1O75717 1129 aaPredicted RBP4.2□□□□□ -1.74
VTA1-204ENST00000491881 TMCC1O94876 653 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 CD53P19397 219 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 CD72P21854 359 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 ELF1P32519 619 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 GGT5P36269 586 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 PTPN9P43378 593 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 PLCD1P51178 756 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 CLCNKBP51801 687 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 FOXG1P55316 489 aaPredicted RBP4.2□□□□□ -1.74
VTA1-204ENST00000491881 CAMK1Q14012 370 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 SMTNL2Q2TAL5 461 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 ENTPD8Q5MY95 495 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 PXDC1Q5TGL8 231 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 KDELC2Q7Z4H8 507 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 TECPR1Q7Z6L1 1165 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 WDR5BQ86VZ2 330 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.2□□□□□ -1.74
VTA1-204ENST00000491881 SETD9Q8NE22 299 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 SPATA3Q8NHX4 192 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 RUFY2Q8WXA3 655 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 RNF125Q96EQ8 232 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 WDR83Q9BRX9 315 aaKnown RBP4.2□□□□□ -1.74
VTA1-204ENST00000491881 UNC45AQ9H3U1 944 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 JMJD4Q9H9V9 463 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 VEZTQ9HBM0 779 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 RNF146Q9NTX7 359 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 BEX4Q9NWD9 120 aaPredicted RBP4.2□□□□□ -1.74
VTA1-204ENST00000491881 GRHL1Q9NZI5 618 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 MSRB1Q9NZV6 116 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 ZNF69Q9UC07 566 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 FBXO40Q9UH90 709 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 CNPY2Q9Y2B0 182 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 RAP2CQ9Y3L5 183 aa4.2□□□□□ -1.74
VTA1-204ENST00000491881 TTBK1Q5TCY1 1321 aaPredicted RBP4.2□□□□□ -1.74
VTA1-204ENST00000491881 GOLGA6L10A0A0M3HER8 536 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 TNPO2O14787 897 aaKnown RBP4.19□□□□□ -1.74
VTA1-204ENST00000491881 CEP104O60308 925 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 ZC3H11AO75152 810 aaKnown RBP eCLIP4.19□□□□□ -1.74
VTA1-204ENST00000491881 FGBP02675 491 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 YWHAQP27348 245 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 DDIT3P35638 169 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 POLGP54098 1239 aaPredicted RBP4.19□□□□□ -1.74
VTA1-204ENST00000491881 CDH15P55291 814 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 MTX1Q13505 466 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 PIK3CD-AS1Q5SR53 167 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 SLC9C2Q5TAH2 1124 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 AWAT2Q6E213 333 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 MON1AQ86VX9 555 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 TSPYL6Q8N831 410 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 LRRC57Q8N9N7 239 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 PCYOX1LQ8NBM8 494 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 ZCCHC10Q8TBK6 192 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 WIPF2Q8TF74 440 aaPredicted RBP4.19□□□□□ -1.74
VTA1-204ENST00000491881 TBC1D22AQ8WUA7 517 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 HDAC7Q8WUI4 952 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 IGFBPL1Q8WX77 278 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 ZUFSPQ96AP4 578 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 COQ8BQ96D53 544 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 ZBTB10Q96DT7 871 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 ELP4Q96EB1 424 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 KIF1BPQ96EK5 621 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 MPP4Q96JB8 637 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 FUZQ9BT04 418 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 TRMOQ9BU70 441 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 PAIP1Q9H074 479 aaKnown RBP4.19□□□□□ -1.74
VTA1-204ENST00000491881 TTYH1Q9H313 450 aaPredicted RBP4.19□□□□□ -1.74
VTA1-204ENST00000491881 SLC32A1Q9H598 525 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 CXorf56Q9H5V9 222 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 TASP1Q9H6P5 420 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 SPAG4Q9NPE6 437 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 PNRC2Q9NPJ4 139 aaKnown RBP4.19□□□□□ -1.74
VTA1-204ENST00000491881 ZDHHC7Q9NXF8 308 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 IL1RAPL1Q9NZN1 696 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 CDH22Q9UJ99 828 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 ZNF580Q9UK33 172 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 COG5Q9UP83 839 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.19□□□□□ -1.74
VTA1-204ENST00000491881 CYP46A1Q9Y6A2 500 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 SLC4A4Q9Y6R1 1079 aa4.19□□□□□ -1.74
VTA1-204ENST00000491881 TRBV5-7A0A0A0MS05 114 aa4.18□□□□□ -1.74
VTA1-204ENST00000491881 C17orf113A0A1B0GUU1 675 aa4.18□□□□□ -1.74
VTA1-204ENST00000491881 TARSL2A2RTX5 802 aaKnown RBP4.18□□□□□ -1.74
VTA1-204ENST00000491881 PPEF2O14830 753 aa4.18□□□□□ -1.74
VTA1-204ENST00000491881 RNMTO43148 476 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms