RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ASTE1Q2TB18 679 aaPredicted RBP11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 BRMS1LQ5PSV4 323 aa11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 PRAMEF14Q5SWL7 426 aa11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 PLEKHA7Q6IQ23 1121 aa11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 USP30Q70CQ3 517 aa11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 RHOT2Q8IXI1 618 aa11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 CCAR2Q8N163 923 aaKnown RBP11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 PGAP3Q96FM1 320 aaPredicted RBP11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 BTN2A3PQ96KV6 586 aa11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 NPY6RQ99463 290 aa11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 EIF3CQ99613 913 aaKnown RBP11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 NEUROG2Q9H2A3 272 aa11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 ANLNQ9NQW6 1124 aa11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 KIAA1522Q9P206 1035 aaPredicted RBP11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 UVRAGQ9P2Y5 699 aa11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 TPX2Q9ULW0 747 aaKnown RBP11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 PCDHGB2Q9Y5G2 931 aa11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 SNX10Q9Y5X0 201 aa11.31□□□□□ -0.6
TMEM39A-211ENST00000491685 EDDM13A0A1B0GTR0 161 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 A0A1W2PPC4 97 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 FLRT2O43155 660 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 RNASEH2AO75792 299 aaKnown RBP11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 DKK1O94907 266 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 TMEM253P0C7T8 217 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 SLC8A1P32418 973 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 RFC1P35251 1148 aaPredicted RBP11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 DRD3P35462 400 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 PTPN9P43378 593 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 CCT8P50990 548 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 ZNF143P52747 638 aaPredicted RBP11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 ADPRHP54922 357 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 OXCT1P55809 520 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 PIGHQ14442 188 aaPredicted RBP11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 SHBQ15464 509 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 TEAD4Q15561 434 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 FBXL22Q6P050 247 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 LRRC31Q6UY01 552 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 CCNI2Q6ZMN8 369 aaPredicted RBP11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 STRADAQ7RTN6 431 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 C14orf80Q86SX3 495 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 PDZD3Q86UT5 571 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 KDM1BQ8NB78 822 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 RHBDD1Q8TEB9 315 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 FRS2Q8WU20 508 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 SKA1Q96BD8 255 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 ALG14Q96F25 216 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 THAP2Q9H0W7 228 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 SPTLC3Q9NUV7 552 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 CTTNBP2NLQ9P2B4 639 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 IP6K2Q9UHH9 426 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 VANGL2Q9ULK5 521 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 NCKAP1Q9Y2A7 1128 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 PCDHA13Q9Y5I0 950 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 HS3ST4Q9Y661 456 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 MYLKQ15746 1914 aa11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 HELZ2Q9BYK8 2649 aaKnown RBP11.3□□□□□ -0.6
TMEM39A-211ENST00000491685 TARSL2A2RTX5 802 aaKnown RBP11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 TMEM191CA6NGB0 347 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 C2CD4BA6NLJ0 364 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 RNF103O00237 685 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 CBX4O00257 560 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 ENDOD1O94919 500 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 NDUFA10O95299 355 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 CYP1A2P05177 515 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 PSMA2P25787 234 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 NNMTP40261 264 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 NOP2P46087 812 aaKnown RBP11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 NAP1L1P55209 391 aaKnown RBP11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 ATP11AP98196 1134 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 AUHQ13825 339 aaKnown RBP11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 SUZ12Q15022 739 aaKnown RBP11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 POM121L1PQ3SYA9 428 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 CCDC14Q49A88 953 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 TTC39BQ5VTQ0 682 aaPredicted RBP11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 RNF219Q5W0B1 726 aaPredicted RBP11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 SCYL2Q6P3W7 929 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 GATAD2AQ86YP4 633 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 LRRC8AQ8IWT6 810 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 MDM1Q8TC05 714 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 FNIP1Q8TF40 1166 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 NT5C3BQ969T7 300 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 CFAP57Q96MR6 1250 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 RPRD1AQ96P16 312 aaPredicted RBP11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 MCEEQ96PE7 176 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 OMDQ99983 421 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 CNPY3Q9BT09 278 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 TMPRSS4Q9NRS4 437 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 SARDHQ9UL12 918 aa11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 APOBEC2Q9Y235 224 aaKnown RBP11.29□□□□□ -0.6
TMEM39A-211ENST00000491685 A0A1B0GTQ1 180 aa11.28□□□□□ -0.6
TMEM39A-211ENST00000491685 A0A1B0GVM2 712 aa11.28□□□□□ -0.6
TMEM39A-211ENST00000491685 A0A1W2PR77 199 aa11.28□□□□□ -0.6
TMEM39A-211ENST00000491685 FAM149AA5PLN7 773 aa11.28□□□□□ -0.6
TMEM39A-211ENST00000491685 TCAF2A6NFQ2 919 aa11.28□□□□□ -0.6
TMEM39A-211ENST00000491685 VILLO15195 856 aa11.28□□□□□ -0.6
TMEM39A-211ENST00000491685 ARHGAP6O43182 974 aa11.28□□□□□ -0.6
TMEM39A-211ENST00000491685 CNTN5O94779 1100 aa11.28□□□□□ -0.6
TMEM39A-211ENST00000491685 LCA5LO95447 670 aa11.28□□□□□ -0.6
TMEM39A-211ENST00000491685 IL1BP01584 269 aa11.28□□□□□ -0.6
TMEM39A-211ENST00000491685 GOT1P17174 413 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms