RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 NPC1O15118 1278 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 OPHN1O60890 802 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 TMCC1O94876 653 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 SRCP12931 536 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 MMP13P45452 471 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 GDF10P55107 478 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 ST8SIA6P61647 398 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 DR1Q01658 176 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 SLC10A7Q0GE19 358 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 ZBTB17Q13105 803 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 FBXO43Q4G163 708 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 TEX44Q53QW1 395 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 FSTL4Q6MZW2 842 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 SYDE1Q6ZW31 735 aaPredicted RBP18.96■□□□□ 0.63
MCF2L-230ENST00000491028 MAATS1Q7Z4T9 603 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 CCDC89Q8N998 374 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 FAM71DQ8N9W8 422 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 ATP11CQ8NB49 1132 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 KCNV2Q8TDN2 545 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 RPL10LQ96L21 214 aaKnown RBP18.96■□□□□ 0.63
MCF2L-230ENST00000491028 MRGPRX3Q96LB0 322 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 SPATA13Q96N96 652 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 PSKH2Q96QS6 385 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 CINPQ9BW66 212 aaPredicted RBP18.96■□□□□ 0.63
MCF2L-230ENST00000491028 CA14Q9ULX7 337 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 PLA2G4CQ9UP65 541 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 SLC8A2Q9UPR5 921 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 MRPS17Q9Y2R5 130 aaKnown RBP18.96■□□□□ 0.63
MCF2L-230ENST00000491028 UNC80Q8N2C7 3258 aa18.96■□□□□ 0.63
MCF2L-230ENST00000491028 K7EQS6 105 aa18.95■□□□□ 0.62
MCF2L-230ENST00000491028 ATP9BO43861 1147 aa18.95■□□□□ 0.62
MCF2L-230ENST00000491028 GCATO75600 419 aa18.95■□□□□ 0.62
MCF2L-230ENST00000491028 JCHAINP01591 159 aa18.95■□□□□ 0.62
MCF2L-230ENST00000491028 HNRNPLP14866 589 aaKnown RBP eCLIP18.95■□□□□ 0.62
MCF2L-230ENST00000491028 ACTN2P35609 894 aa18.95■□□□□ 0.62
MCF2L-230ENST00000491028 STK19P49842 368 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-230ENST00000491028 PTPRNQ16849 979 aa18.95■□□□□ 0.62
MCF2L-230ENST00000491028 C4orf22Q6V702 233 aa18.95■□□□□ 0.62
MCF2L-230ENST00000491028 LEKR1Q6ZMV7 388 aa18.95■□□□□ 0.62
MCF2L-230ENST00000491028 CYB5D2Q8WUJ1 264 aa18.95■□□□□ 0.62
MCF2L-230ENST00000491028 ISG20Q96AZ6 181 aaKnown RBP18.95■□□□□ 0.62
MCF2L-230ENST00000491028 TEKT5Q96M29 485 aa18.95■□□□□ 0.62
MCF2L-230ENST00000491028 PCDH9Q9HC56 1237 aa18.95■□□□□ 0.62
MCF2L-230ENST00000491028 CD320Q9NPF0 282 aa18.95■□□□□ 0.62
MCF2L-230ENST00000491028 RBM22Q9NW64 420 aaKnown RBP eCLIP18.95■□□□□ 0.622e-10■■■□□ 16.2
MCF2L-230ENST00000491028 KLHL8Q9P2G9 620 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-230ENST00000491028 THAP10Q9P2Z0 257 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-230ENST00000491028 MUTYHQ9UIF7 546 aa18.95■□□□□ 0.62
MCF2L-230ENST00000491028 ACTL7AQ9Y615 435 aa18.95■□□□□ 0.62
MCF2L-230ENST00000491028 FAM187AA6NFU0 413 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 SLU7O95391 586 aaKnown RBP18.94■□□□□ 0.62
MCF2L-230ENST00000491028 MT-CO1P00395 513 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 IFNB1P01574 187 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 PTGIRP43119 386 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 STARD6P59095 220 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 RHOAP61586 193 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 ZNF234Q14588 700 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 CYTH1Q15438 398 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 ANKRD20A2Q5SQ80 823 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 ANKRD20A1Q5TYW2 823 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 ANKRD20A3Q5VUR7 823 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 ITPRIPL1Q6GPH6 555 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 C8orf74Q6P047 294 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 C22orf39Q6P5X5 142 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 SFTPA1Q8IWL2 248 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 ZNF567Q8N184 647 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 PCDH20Q8N6Y1 951 aaKnown RBP18.94■□□□□ 0.62
MCF2L-230ENST00000491028 CCHCR1Q8TD31 782 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 USP33Q8TEY7 942 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 SORCS1Q8WY21 1168 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 EZH1Q92800 747 aaPredicted RBP18.94■□□□□ 0.62
MCF2L-230ENST00000491028 MYO19Q96H55 970 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 MGME1Q9BQP7 344 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 NT5MQ9NPB1 228 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 PAK5Q9P286 719 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 LHX3Q9UBR4 397 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 ATP8A1Q9Y2Q0 1164 aa18.94■□□□□ 0.62
MCF2L-230ENST00000491028 CUL9Q8IWT3 2517 aa18.93■□□□□ 0.62
MCF2L-230ENST00000491028 KRBA1A5PL33 1030 aa18.93■□□□□ 0.62
MCF2L-230ENST00000491028 EGFP01133 1207 aa18.93■□□□□ 0.62
MCF2L-230ENST00000491028 KRT14P02533 472 aa18.93■□□□□ 0.62
MCF2L-230ENST00000491028 HLA-DQB2P05538 268 aa18.93■□□□□ 0.62
MCF2L-230ENST00000491028 KIR2DL1P43626 348 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-230ENST00000491028 PTK6Q13882 451 aa18.93■□□□□ 0.62
MCF2L-230ENST00000491028 CCINQ13939 588 aa18.93■□□□□ 0.62
MCF2L-230ENST00000491028 PPP1R7Q15435 360 aa18.93■□□□□ 0.62
MCF2L-230ENST00000491028 FNDC3BQ53EP0 1204 aaKnown RBP18.93■□□□□ 0.62
MCF2L-230ENST00000491028 ALG1LQ6GMV1 187 aa18.93■□□□□ 0.62
MCF2L-230ENST00000491028 PID1Q7Z2X4 250 aa18.93■□□□□ 0.62
MCF2L-230ENST00000491028 TRMT11Q7Z4G4 463 aaKnown RBP18.93■□□□□ 0.62
MCF2L-230ENST00000491028 JAMLQ86YT9 394 aa18.93■□□□□ 0.62
MCF2L-230ENST00000491028 CNTD1Q8N815 330 aa18.93■□□□□ 0.62
MCF2L-230ENST00000491028 ZNF513Q8N8E2 541 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-230ENST00000491028 CCDC110Q8TBZ0 833 aa18.93■□□□□ 0.62
MCF2L-230ENST00000491028 ZNF419Q96HQ0 510 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-230ENST00000491028 PPP1R2P1Q96PQ5 205 aa18.93■□□□□ 0.62
MCF2L-230ENST00000491028 CEP41Q9BYV8 373 aa18.93■□□□□ 0.62
MCF2L-230ENST00000491028 POLR1EQ9GZS1 481 aaKnown RBP18.93■□□□□ 0.62
MCF2L-230ENST00000491028 FCF1Q9Y324 198 aaKnown RBP18.93■□□□□ 0.62
MCF2L-230ENST00000491028 NEU2Q9Y3R4 380 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms