RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 USP3Q9Y6I4 520 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 CSNK1G3Q9Y6M4 447 aa7.36□□□□□ -1.23
PDLIM1-203ENST00000490391 PKDREJQ9NTG1 2253 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 ZNF106Q9H2Y7 1883 aaKnown RBP7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 A0A1B0GTL3 188 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 EDDM13A0A1B0GTR0 161 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 A0A1W2PQM1 296 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 PRR19A6NJB7 356 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 SLC31A1O15431 190 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 SLC7A4O43246 635 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 PRPF6O94906 941 aaKnown RBP7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 CSF2P04141 144 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 ASLP04424 464 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 ALAS2P22557 587 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 CD82P27701 267 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 SLC6A4P31645 630 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 CSKP41240 450 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 ARSDP51689 593 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 TAS2R38P59533 333 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 ZNF445P59923 1031 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 TNNC1P63316 161 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 FZD2Q14332 565 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 DHX8Q14562 1220 aaKnown RBP7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 MCM6Q14566 821 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 NR0B2Q15466 257 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 DEFB133Q30KQ1 61 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 LACTB2Q53H82 288 aaPredicted RBP7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 L1TD1Q5T7N2 865 aaKnown RBP7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 ACOT1Q86TX2 421 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 SFR1Q86XK3 245 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 CBWD2Q8IUF1 395 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 STK40Q8N2I9 435 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 GPD1LQ8N335 351 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 C12orf29Q8N999 325 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 PTPRN2Q92932 1015 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 NAT6Q93015 286 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 JAKMIP2Q96AA8 810 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 PLD4Q96BZ4 506 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 TMA16Q96EY4 203 aaKnown RBP7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 TNIP3Q96KP6 325 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 SDCBP2Q9H190 292 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 PCIF1Q9H4Z3 704 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 FZD3Q9NPG1 666 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 DNAJC28Q9NX36 388 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 DONSONQ9NYP3 566 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 MARCH2Q9P0N8 246 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 DKK3Q9UBP4 350 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 HMGXB4Q9UGU5 601 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 SLCO3A1Q9UIG8 710 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 SARDHQ9UL12 918 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 RNF112Q9ULX5 631 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 LOXL2Q9Y4K0 774 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 ACANP16112 2415 aa7.35□□□□□ -1.23
PDLIM1-203ENST00000490391 TMX2-CTNND1H3BSU7 103 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 K7EM74 188 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 TPP1O14773 563 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 AQP9O43315 295 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 VPS4BO75351 444 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 IL1BP01584 269 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 KRT18P05783 430 aaKnown RBP7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 JMJD7P0C870 316 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 FAM200BP0CF97 657 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 RALAP11233 206 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 LIFP15018 202 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 VAV1P15498 845 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 NR1D1P20393 614 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 CASP5P51878 434 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 CLDN2P57739 230 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 MYL6P60660 151 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 ST8SIA6P61647 398 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 CNTN1Q12860 1018 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 ELAVL3Q14576 367 aaKnown RBP7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 SURF1Q15526 300 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 TPRG1LQ5T0D9 272 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 MPP7Q5T2T1 576 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 TMPRSS9Q7Z410 1059 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 CRYBG2Q8N1P7 616 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 FBXO18Q8NFZ0 1043 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 JPH3Q8WXH2 748 aaPredicted RBP7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 RAD54LQ92698 747 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 USP7Q93009 1102 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 NKD1Q969G9 470 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 TCTN2Q96GX1 697 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 CDK5RAP3Q96JB5 506 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 PPP1R13BQ96KQ4 1090 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 CATSPER2Q96P56 530 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 ACCSQ96QU6 501 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 CDK5RAP1Q96SZ6 601 aaKnown RBP7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 MDFIQ99750 246 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 FGFBP2Q9BYJ0 223 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 STRADBQ9C0K7 418 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 SYNDIG1Q9H7V2 258 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 VRTNQ9H8Y1 702 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 PNPLA8Q9NP80 782 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 FAM49BQ9NUQ9 324 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 NOL7Q9UMY1 257 aaKnown RBP7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 VPS4AQ9UN37 437 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 ERVW-1Q9UQF0 538 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 TP53TG5Q9Y2B4 290 aa7.34□□□□□ -1.23
PDLIM1-203ENST00000490391 SPTY2D1-AS1A0A0U1RR47 76 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms