RNA–Protein interactions for RNA: ENST00000490308.1

EPB41-212, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-212ENST00000490308 RIPK1Q13546 671 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 SNX1Q13596 522 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 DPYSQ14117 519 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 FRG1Q14331 258 aaKnown RBP2.83□□□□□ -1.96
EPB41-212ENST00000490308 UBXN2BQ14CS0 331 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 ACOX1Q15067 660 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 RPS6KA1Q15418 735 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 ZRSR1Q15695 479 aaKnown RBP2.83□□□□□ -1.96
EPB41-212ENST00000490308 NAB2Q15742 525 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 TBR1Q16650 682 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 ZNF568Q3ZCX4 644 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 SLC9B1Q4ZJI4 515 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 XKR9Q5GH70 373 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 ACSM2BQ68CK6 577 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 ZC3H14Q6PJT7 736 aaKnown RBP2.83□□□□□ -1.96
EPB41-212ENST00000490308 AFTPHQ6ULP2 937 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 CRELD2Q6UXH1 353 aaPredicted RBP2.83□□□□□ -1.96
EPB41-212ENST00000490308 CD300LDQ6UXZ3 194 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 LPCAT2Q7L5N7 544 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 PLPPR4Q7Z2D5 763 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 SPATA19Q7Z5L4 167 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 KBTBD6Q86V97 674 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 RFX6Q8HWS3 928 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 KDM8Q8N371 416 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 GUF1Q8N442 669 aaKnown RBP2.83□□□□□ -1.96
EPB41-212ENST00000490308 TTLL6Q8N841 843 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 FAM133AQ8N9E0 248 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 TC2NQ8N9U0 490 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 LPCAT1Q8NF37 534 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 Q8NFD4 153 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 OR7G3Q8NG95 312 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 MDM1Q8TC05 714 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 GIMAP1Q8WWP7 306 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 ATL1Q8WXF7 558 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 RAB40AQ8WXH6 277 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 ALG3Q92685 438 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 GATA6Q92908 595 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 GTF3C6Q969F1 213 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 SCARF2Q96GP6 870 aaPredicted RBP2.83□□□□□ -1.96
EPB41-212ENST00000490308 LRIG1Q96JA1 1093 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 CNOT6LQ96LI5 555 aaKnown RBP2.83□□□□□ -1.96
EPB41-212ENST00000490308 UROC1Q96N76 676 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 SLC46A1Q96NT5 459 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 TACO1Q9BSH4 297 aaKnown RBP2.83□□□□□ -1.96
EPB41-212ENST00000490308 WDR11Q9BZH6 1224 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 TTYH3Q9C0H2 523 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.83□□□□□ -1.96
EPB41-212ENST00000490308 SLC6A15Q9H2J7 730 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 TMEM206Q9H813 350 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 AKIRIN1Q9H9L7 192 aaPredicted RBP2.83□□□□□ -1.96
EPB41-212ENST00000490308 TNFRSF12AQ9NP84 129 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 FSCN3Q9NQT6 498 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 ASAH2Q9NR71 780 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 PCDHB16Q9NRJ7 776 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 SLC35D1Q9NTN3 355 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 THAP1Q9NVV9 213 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 COPG2Q9UBF2 871 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 FBXL17Q9UF56 701 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 VPS51Q9UID3 782 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 LAMP5Q9UJQ1 280 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 FBXW2Q9UKT8 454 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 NENFQ9UMX5 172 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 SNX7Q9UNH6 387 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 STX8Q9UNK0 236 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.83□□□□□ -1.96
EPB41-212ENST00000490308 MRPS7Q9Y2R9 242 aaKnown RBP2.83□□□□□ -1.96
EPB41-212ENST00000490308 PTRH2Q9Y3E5 179 aaKnown RBP2.83□□□□□ -1.96
EPB41-212ENST00000490308 SIT1Q9Y3P8 196 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 PCDHA10Q9Y5I2 948 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 MYO15BQ96JP2 1530 aa2.83□□□□□ -1.96
EPB41-212ENST00000490308 LOC105369274A0A096LPK9 316 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 LOC102723532A0A0G2JNH3 316 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 A0A0G2JPF8 293 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 C13orf42A0A1B0GVH6 325 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 ZC3H12DA2A288 527 aaKnown RBP2.82□□□□□ -1.96
EPB41-212ENST00000490308 URADA6NGE7 173 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 SDR42E2A6NKP2 422 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 HNRNPCL3B7ZW38 293 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 AKR1B15C9JRZ8 316 aaPredicted RBP2.82□□□□□ -1.96
EPB41-212ENST00000490308 H0YCG3 227 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 PER2O15055 1255 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 CLDN3O15551 220 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 CYP26A1O43174 497 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 TGFB1I1O43294 461 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 TRIAP1O43715 76 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 STRNO43815 780 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 PRICKLE3O43900 615 aaPredicted RBP2.82□□□□□ -1.96
EPB41-212ENST00000490308 ERN1O75460 977 aaKnown RBP2.82□□□□□ -1.96
EPB41-212ENST00000490308 RAD17O75943 681 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 TOX4O94842 621 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 REC8O95072 547 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 HLA-DQA2P01906 255 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 HIST1H2ABP04908 130 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 ALPPP05187 535 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 ENO1P06733 434 aaKnown RBP2.82□□□□□ -1.96
EPB41-212ENST00000490308 HNRNPCL4P0DMR1 293 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 CYP2C8P10632 490 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 ALPPL2P10696 532 aa2.82□□□□□ -1.96
EPB41-212ENST00000490308 TOP1P11387 765 aaKnown RBP2.82□□□□□ -1.96
EPB41-212ENST00000490308 VPREB1P12018 145 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms