RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 KCNJ18B7U540 433 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 DIRC3C9JPN6 131 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 K7EPI3 171 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 EBAG9O00559 213 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 AP3D1O14617 1153 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 CLGNO14967 610 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 PRICKLE3O43900 615 aaPredicted RBP3.11□□□□□ -1.91
UBXN4-208ENST00000490163 ADAMTS4O75173 837 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 PALMO75781 387 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 TRIM16O95361 564 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 FGFR4P22455 802 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 RYKP34925 604 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 ADRA1BP35368 520 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 PDE6CP51160 858 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 ZNF134P52741 427 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 CDH15P55291 814 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 PSMC1P62191 440 aaKnown RBP3.11□□□□□ -1.91
UBXN4-208ENST00000490163 ARHGAP8P85298 464 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 CSTF3Q12996 717 aaKnown RBP3.11□□□□□ -1.91
UBXN4-208ENST00000490163 TAF3Q5VWG9 929 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 CES4AQ5XG92 561 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 TMEM88Q6PEY1 159 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 LINC00346Q8IVM7 164 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 LINS1Q8NG48 757 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 FBXO30Q8TB52 745 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 CCHCR1Q8TD31 782 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 LRRC8CQ8TDW0 803 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 GRK7Q8WTQ7 553 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 INTS4Q96HW7 963 aaKnown RBP3.11□□□□□ -1.91
UBXN4-208ENST00000490163 CNDP2Q96KP4 475 aaKnown RBP3.11□□□□□ -1.91
UBXN4-208ENST00000490163 TEPSINQ96N21 525 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 PACSIN1Q9BY11 444 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 CXorf36Q9H7Y0 433 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 CARS2Q9HA77 564 aaKnown RBP3.11□□□□□ -1.91
UBXN4-208ENST00000490163 TMEM184CQ9NVA4 438 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 KIAA1456Q9P272 454 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 COPG1Q9Y678 874 aaKnown RBP3.11□□□□□ -1.91
UBXN4-208ENST00000490163 ANKRD26Q9UPS8 1709 aa3.11□□□□□ -1.91
UBXN4-208ENST00000490163 USP32Q8NFA0 1604 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 NCAPD2Q15021 1401 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 UHRF1BP1Q6BDS2 1440 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 SETD5Q9C0A6 1442 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 CPS1P31327 1500 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 CCDC69A6NI79 296 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 WDR46O15213 610 aaKnown RBP3.1□□□□□ -1.91
UBXN4-208ENST00000490163 GPRIN2O60269 458 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 PRSS23O95084 383 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 ATP5BP06576 529 aaKnown RBP3.1□□□□□ -1.91
UBXN4-208ENST00000490163 CCNA2P20248 432 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 PCSK6P29122 969 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 ADSLP30566 484 aaPredicted RBP3.1□□□□□ -1.91
UBXN4-208ENST00000490163 CCR3P51677 355 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 CLDN15P56746 228 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 COG2Q14746 738 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 UTP14CQ5TAP6 766 aaKnown RBP3.1□□□□□ -1.91
UBXN4-208ENST00000490163 SHEQ5VZ18 495 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 C16orf89Q6UX73 402 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 ZNF804AQ7Z570 1209 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 TMEM200AQ86VY9 491 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 NUDT10Q8NFP7 164 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 HDAC7Q8WUI4 952 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 EDC3Q96F86 508 aaKnown RBP3.1□□□□□ -1.91
UBXN4-208ENST00000490163 NUDT11Q96G61 164 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 FRG2BQ96QU4 278 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.1□□□□□ -1.91
UBXN4-208ENST00000490163 OR10A2Q9H208 303 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 OPA3Q9H6K4 179 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 OLAHQ9NV23 265 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 HMG20BQ9P0W2 317 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 FZD4Q9ULV1 537 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 NRKQ7Z2Y5 1582 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 NSD2O96028 1365 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 MST1RQ04912 1400 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 SCAPERQ9BY12 1400 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 CEP170BQ9Y4F5 1589 aaPredicted RBP3.1□□□□□ -1.91
UBXN4-208ENST00000490163 OOEPA6NGQ2 149 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 MCF2LO15068 1137 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 MUSKO15146 869 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 ADAP00813 363 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 CLTBP09497 229 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 ATP5JP18859 108 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 RPL13P26373 211 aaKnown RBP3.1□□□□□ -1.91
UBXN4-208ENST00000490163 PON1P27169 355 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 EIF2DP41214 584 aaKnown RBP3.1□□□□□ -1.91
UBXN4-208ENST00000490163 ANXA11P50995 505 aaKnown RBP3.1□□□□□ -1.91
UBXN4-208ENST00000490163 RCAN1P53805 252 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 EVCP57679 992 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 ASIC1P78348 528 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 TMF1P82094 1093 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 HFEQ30201 348 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 PTCHD3Q3KNS1 767 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 FAM174BQ3ZCQ3 159 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 C1orf141Q5JVX7 400 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 TBC1D9BQ66K14 1250 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 DNAAF5Q86Y56 855 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 IGFBPL1Q8WX77 278 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 MCRS1Q96EZ8 462 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 BOD1Q96IK1 185 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 KCNK16Q96T55 309 aa3.1□□□□□ -1.91
UBXN4-208ENST00000490163 C1orf21Q9H246 121 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms