RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	ZNF189	O75820	626 aa	Predicted RBP	18.56	■□□□□ 0.56
SRM-206	ENST00000490101	GAS8	O95995	478 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	CYP17A1	P05093	508 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	STIP1	P31948	543 aa	Known RBP	18.56	■□□□□ 0.56
SRM-206	ENST00000490101	CHKA	P35790	457 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	OPRD1	P41143	372 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	DGKE	P52429	567 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	NDST2	P52849	883 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	CDH4	P55283	916 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	GALNT2	Q10471	571 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	NAA30	Q147X3	362 aa	Predicted RBP	18.56	■□□□□ 0.56
SRM-206	ENST00000490101	SLC45A4	Q5BKX6	768 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	DARS2	Q6PI48	645 aa	Known RBP	18.56	■□□□□ 0.56
SRM-206	ENST00000490101	ZC3H18	Q86VM9	953 aa	Known RBP	18.56	■□□□□ 0.56
SRM-206	ENST00000490101	LRRC49	Q8IUZ0	686 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	CDKL3	Q8IVW4	592 aa	Predicted RBP	18.56	■□□□□ 0.56
SRM-206	ENST00000490101	ARHGAP12	Q8IWW6	846 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	HJURP	Q8NCD3	748 aa	Predicted RBP	18.56	■□□□□ 0.56
SRM-206	ENST00000490101	LOXL4	Q96JB6	756 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	CNTNAP3B	Q96NU0	1288 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	CNTNAP3	Q9BZ76	1288 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	ANKZF1	Q9H8Y5	726 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	TBC1D14	Q9P2M4	693 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101	DMGDH	Q9UI17	866 aa	Known RBP	18.56	■□□□□ 0.56
SRM-206	ENST00000490101	NEU2	Q9Y3R4	380 aa		18.56	■□□□□ 0.56
SRM-206	ENST00000490101		A0A1B0GVM2	712 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	TCAF2	A6NFQ2	919 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	PPP1R12A	O14974	1030 aa	Predicted RBP	18.55	■□□□□ 0.56
SRM-206	ENST00000490101	TSPAN3	O60637	253 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	RPS24	P62847	133 aa	Known RBP	18.55	■□□□□ 0.56
SRM-206	ENST00000490101	MRPS25	P82663	173 aa	Known RBP	18.55	■□□□□ 0.56
SRM-206	ENST00000490101	ZNF33A	Q06730	810 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	PRKD1	Q15139	912 aa	Predicted RBP	18.55	■□□□□ 0.56
SRM-206	ENST00000490101	PLK5	Q496M5	336 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	IL31	Q6EBC2	164 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	TFAP2D	Q7Z6R9	452 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	CFAP52	Q8N1V2	620 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	TSTD1	Q8NFU3	115 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	OTUB2	Q96DC9	234 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	TMA16	Q96EY4	203 aa	Known RBP	18.55	■□□□□ 0.56
SRM-206	ENST00000490101	CCDC114	Q96M63	670 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	TSGA13	Q96PP4	275 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	ERP44	Q9BS26	406 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	TMEM121	Q9BTD3	319 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	TPSD1	Q9BZJ3	242 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	NOL6	Q9H6R4	1146 aa	Known RBP	18.55	■□□□□ 0.56
SRM-206	ENST00000490101	USP29	Q9HBJ7	922 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	RXFP3	Q9NSD7	469 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	NDFIP2	Q9NV92	336 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101	INVS	Q9Y283	1065 aa		18.55	■□□□□ 0.56
SRM-206	ENST00000490101		K7EQS6	105 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	SLC9A3R1	O14745	358 aa	Predicted RBP	18.54	■□□□□ 0.56
SRM-206	ENST00000490101	HEXIM1	O94992	359 aa	Known RBP	18.54	■□□□□ 0.56
SRM-206	ENST00000490101	MAP3K6	O95382	1288 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	ZNF806	P0C7X5	589 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	MPL	P40238	635 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	YBEY	P58557	167 aa	Predicted RBP	18.54	■□□□□ 0.56
SRM-206	ENST00000490101	SLC7A5	Q01650	507 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	PTK6	Q13882	451 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	DHCR24	Q15392	516 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	ELF2	Q15723	593 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	GAB4	Q2WGN9	574 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	MPPE1	Q53F39	396 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	MPP7	Q5T2T1	576 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	RNF43	Q68DV7	783 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	GSTA5	Q7RTV2	222 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	CIR1	Q86X95	450 aa	Predicted RBP	18.54	■□□□□ 0.56
SRM-206	ENST00000490101	TP53INP2	Q8IXH6	220 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	CCDC33	Q8N5R6	958 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	USP33	Q8TEY7	942 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	TFB1M	Q8WVM0	346 aa	Known RBP	18.54	■□□□□ 0.56
SRM-206	ENST00000490101	HDAC11	Q96DB2	347 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	RTP4	Q96DX8	246 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	ZC3H10	Q96K80	434 aa	Known RBP	18.54	■□□□□ 0.56
SRM-206	ENST00000490101	SLC39A8	Q9C0K1	460 aa		18.54	■□□□□ 0.56
SRM-206	ENST00000490101	DUSP15	Q9H1R2	295 aa	Predicted RBP	18.54	■□□□□ 0.56
SRM-206	ENST00000490101	CEP295	Q9C0D2	2601 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	SGK1	O00141	431 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	TUBB	P07437	444 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	ADRB1	P08588	477 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	RBL1	P28749	1068 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	OR1E1	P30953	314 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	GARS	P41250	739 aa	Known RBP	18.53	■□□□□ 0.56
SRM-206	ENST00000490101	SLC6A11	P48066	632 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	SGSH	P51688	502 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	DRG2	P55039	364 aa	Known RBP	18.53	■□□□□ 0.56
SRM-206	ENST00000490101	PPID	Q08752	370 aa	Known RBP	18.53	■□□□□ 0.56
SRM-206	ENST00000490101	PPP1R7	Q15435	360 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	PARP15	Q460N3	678 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	DUPD1	Q68J44	220 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	ANO7	Q6IWH7	933 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	SFTPA1	Q8IWL2	248 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	ADGRG2	Q8IZP9	1017 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	SEC14L1	Q92503	715 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	NUP205	Q92621	2012 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	CELF6	Q96J87	481 aa	Known RBP	18.53	■□□□□ 0.56
SRM-206	ENST00000490101	LGMN	Q99538	433 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	TRIM51	Q9BSJ1	452 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	RAB17	Q9H0T7	212 aa		18.53	■□□□□ 0.56
SRM-206	ENST00000490101	C10orf88	Q9H8K7	445 aa		18.53	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms