RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 WDR48Q8TAF3 677 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 PARD3BQ8TEW8 1205 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 JPH3Q8WXH2 748 aaPredicted RBP9.44□□□□□ -0.9
SSBP1-212ENST00000489378 NAT6Q93015 286 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 BMFQ96LC9 184 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 IL12RB2Q99665 862 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 PANK2Q9BZ23 570 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 STRADBQ9C0K7 418 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 SLC24A3Q9HC58 644 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 TUBD1Q9UJT1 453 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 PPM1HQ9ULR3 514 aa9.44□□□□□ -0.9
SSBP1-212ENST00000489378 ZFR2Q9UPR6 939 aaKnown RBP9.44□□□□□ -0.9
SSBP1-212ENST00000489378 OTOGQ6ZRI0 2925 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 SPTY2D1-AS1A0A0U1RR47 76 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 POM121BA6NF01 834 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 A6NNZ2 444 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 YJEFN3A6XGL0 299 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 D6RAR5 112 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 E7ENQ6 273 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 TPP1O14773 563 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 EIF3DO15371 548 aaKnown RBP eCLIP9.43□□□□□ -0.9
SSBP1-212ENST00000489378 GCATO75600 419 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 BMP15O95972 392 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 TRIM21P19474 475 aaKnown RBP9.43□□□□□ -0.9
SSBP1-212ENST00000489378 TNFRSF8P28908 595 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 SLC11A2P49281 568 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 AP3M2P53677 418 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 ZACNQ401N2 412 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 ZNF394Q53GI3 561 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 FAM46CQ5VWP2 391 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 PARGQ86W56 976 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 RBFAQ8N0V3 343 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 ARMC2Q8NEN0 867 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 C9orf43Q8TAL5 461 aaPredicted RBP9.43□□□□□ -0.9
SSBP1-212ENST00000489378 OR8D1Q8WZ84 308 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 USP7Q93009 1102 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 ZSCAN31Q96LW9 406 aaPredicted RBP9.43□□□□□ -0.9
SSBP1-212ENST00000489378 CLIC6Q96NY7 704 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 UBXN6Q9BZV1 441 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 NUCKS1Q9H1E3 243 aaKnown RBP9.43□□□□□ -0.9
SSBP1-212ENST00000489378 TCEAL2Q9H3H9 227 aaPredicted RBP9.43□□□□□ -0.9
SSBP1-212ENST00000489378 APOBEC3GQ9HC16 384 aaKnown RBP9.43□□□□□ -0.9
SSBP1-212ENST00000489378 PADI4Q9UM07 663 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 LOXL2Q9Y4K0 774 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 PCDHB11Q9Y5F2 797 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 HIVEP3Q5T1R4 2406 aa9.43□□□□□ -0.9
SSBP1-212ENST00000489378 A0A1W2PQM1 296 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 FAM181BA6NEQ2 426 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 C9orf172C9J069 976 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 RAD51BO15315 384 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 SPINT1O43278 529 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 EXOC3O60645 756 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 LUC7L3O95232 432 aaKnown RBP9.42□□□□□ -0.9
SSBP1-212ENST00000489378 MOCS3O95396 460 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 HLA-DRAP01903 254 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 RPN1P04843 607 aaKnown RBP9.42□□□□□ -0.9
SSBP1-212ENST00000489378 KRT7P08729 469 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 ELAVL4P26378 380 aaKnown RBP9.42□□□□□ -0.9
SSBP1-212ENST00000489378 CCKBRP32239 447 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 DCTP40126 519 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 STAT6P42226 847 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 MLLT10P55197 1068 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 CCL7P80098 99 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 C1orf61Q13536 156 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 FGL2Q14314 439 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 ESPL1Q14674 2120 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 NEK5Q6P3R8 708 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 TICAM1Q8IUC6 712 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 LINC00528Q8N1L1 170 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 SSC4DQ8WTU2 575 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 TAF4BQ92750 862 aa9.42□□□□□ -0.9
SSBP1-212ENST00000489378 HEXIM2Q96MH2 286 aaKnown RBP9.42□□□□□ -0.9
SSBP1-212ENST00000489378 GFM1Q96RP9 751 aaKnown RBP9.42□□□□□ -0.9
SSBP1-212ENST00000489378 ZNF768Q9H5H4 540 aaKnown RBP9.42□□□□□ -0.9
SSBP1-212ENST00000489378 FBXO2Q9UK22 296 aaPredicted RBP9.42□□□□□ -0.9
SSBP1-212ENST00000489378 A0A1W2PQ27 194 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 A0A1W2PQ64 194 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 A0A1W2PQC6 194 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 VPS37CA5D8V6 355 aaPredicted RBP9.41□□□□□ -0.9
SSBP1-212ENST00000489378 C1QTNF3-AMACRE9PGA6 284 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 H3BQV1 296 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 TMX2-CTNND1H3BSU7 103 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 RNF103O00237 685 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 RPLP0P05388 317 aaKnown RBP9.41□□□□□ -0.9
SSBP1-212ENST00000489378 GNLYP22749 145 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 NNMTP40261 264 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 PIK3CAP42336 1068 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 MAPK10P53779 464 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 ADKP55263 362 aaKnown RBP9.41□□□□□ -0.9
SSBP1-212ENST00000489378 ADIGQ0VDE8 80 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 EIF2B5Q13144 721 aaKnown RBP9.41□□□□□ -0.9
SSBP1-212ENST00000489378 PDE1CQ14123 709 aaPredicted RBP9.41□□□□□ -0.9
SSBP1-212ENST00000489378 TMEM259Q4ZIN3 620 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 DCAF6Q58WW2 860 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 MS4A13Q5J8X5 152 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 FHL5Q5TD97 284 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 NUGGCQ68CJ6 796 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 MSANTD2Q6P1R3 559 aa9.41□□□□□ -0.9
SSBP1-212ENST00000489378 KYAT3Q6YP21 454 aaKnown RBP9.41□□□□□ -0.9
SSBP1-212ENST00000489378 CCDC73Q6ZRK6 1079 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms