RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 PCDHB1Q9Y5F3 818 aa12.57□□□□□ -0.4
TTC3-221ENST00000488522 U3KQA8 63 aa12.57□□□□□ -0.4
TTC3-221ENST00000488522 TRPM6Q9BX84 2022 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.56□□□□□ -0.4
TTC3-221ENST00000488522 A0A1W2PQU0 124 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 AFPP02771 609 aaKnown RBP12.56□□□□□ -0.4
TTC3-221ENST00000488522 ZNF18P17022 549 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 GNA15P30679 374 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 LSSP48449 732 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 CDH4P55283 916 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 SKOR1P84550 965 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 DAB2P98082 770 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 CFHR1Q03591 330 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 CCDC173Q0VFZ6 552 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 ZNF177Q13360 481 aaPredicted RBP12.56□□□□□ -0.4
TTC3-221ENST00000488522 EFHC1Q5JVL4 640 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 OTUD1Q5VV17 481 aaPredicted RBP12.56□□□□□ -0.4
TTC3-221ENST00000488522 OLFML1Q6UWY5 402 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 KDM7AQ6ZMT4 941 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 DCP2Q8IU60 420 aaKnown RBP12.56□□□□□ -0.4
TTC3-221ENST00000488522 ZNF683Q8IZ20 524 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 DEFB106AQ8N104 65 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 SLC22A18ASQ8N1D0 253 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 WDTC1Q8N5D0 677 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 DCAF4L2Q8NA75 395 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 RNF214Q8ND24 703 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 OR13H1Q8NG92 308 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 COL26A1Q96A83 441 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 ARRDC3Q96B67 414 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 FAM81BQ96LP2 452 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 DEPDC7Q96QD5 511 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 CPXM1Q96SM3 734 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 LGMNQ99538 433 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 HDAC8Q9BY41 377 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 INTS2Q9H0H0 1204 aaKnown RBP12.56□□□□□ -0.4
TTC3-221ENST00000488522 HSD3B7Q9H2F3 369 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 ASCL3Q9NQ33 180 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 TAB2Q9NYJ8 693 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 VPS28Q9UK41 221 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 PCDHGC3Q9UN70 934 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 ZFR2Q9UPR6 939 aaKnown RBP12.56□□□□□ -0.4
TTC3-221ENST00000488522 CA5BQ9Y2D0 317 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 HS3ST4Q9Y661 456 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 TDRD6O60522 2096 aaKnown RBP12.56□□□□□ -0.4
TTC3-221ENST00000488522 DOCK4Q8N1I0 1966 aa12.56□□□□□ -0.4
TTC3-221ENST00000488522 PIEZO2Q9H5I5 2752 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 PES1O00541 588 aaKnown RBP12.55□□□□□ -0.4
TTC3-221ENST00000488522 SCAMP1O15126 338 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 DAB1O75553 588 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 ZIC2O95409 532 aaPredicted RBP12.55□□□□□ -0.4
TTC3-221ENST00000488522 PRNPP04156 253 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 ALPPL2P10696 532 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 ATP1A3P13637 1013 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 KRT5P13647 590 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 AKT2P31751 481 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 CHRNA3P32297 505 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 TMPRSS3P57727 454 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 CXADRP78310 365 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 KRT83P78385 493 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 KRT31Q15323 416 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 ACCSLQ4AC99 568 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 VWA3BQ502W6 1294 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 HS1BP3Q53T59 392 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 ARTNQ5T4W7 220 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 KYAT3Q6YP21 454 aaKnown RBP12.55□□□□□ -0.4
TTC3-221ENST00000488522 SLC26A9Q7LBE3 791 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 ZNF605Q86T29 641 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 SETD3Q86TU7 594 aaPredicted RBP12.55□□□□□ -0.4
TTC3-221ENST00000488522 ZSCAN30Q86W11 494 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 ZNF397Q8NF99 534 aaPredicted RBP12.55□□□□□ -0.4
TTC3-221ENST00000488522 GRAMD1AQ96CP6 724 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 APOLD1Q96LR9 279 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 CCDC114Q96M63 670 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 C2orf49Q9BVC5 232 aaPredicted RBP12.55□□□□□ -0.4
TTC3-221ENST00000488522 DUSP23Q9BVJ7 150 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 POLR1BQ9H9Y6 1135 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 TMEM51Q9NW97 253 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 ARHGEF38Q9NXL2 777 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 RRN3Q9NYV6 651 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 LIMA1Q9UHB6 759 aaKnown RBP12.55□□□□□ -0.4
TTC3-221ENST00000488522 VANGL2Q9ULK5 521 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 HS3ST3A1Q9Y663 406 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 NAV2Q8IVL1 2488 aa12.55□□□□□ -0.4
TTC3-221ENST00000488522 IGLV3-10A0A075B6K4 115 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 CXorf51AA0A1B0GTR3 108 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 NEMP2A6NFY4 417 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 A6NNZ2 444 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 SLC31A1O15431 190 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 THAP12O43422 761 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 PAGE1O75459 146 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 MT-CO1P00395 513 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 CSF2P04141 144 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 NME1P15531 152 aaKnown RBP12.54□□□□□ -0.4
TTC3-221ENST00000488522 PRLRP16471 622 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 DUSP3P51452 185 aaPredicted RBP12.54□□□□□ -0.4
TTC3-221ENST00000488522 HNRNPKP61978 463 aaKnown RBP eCLIP12.54□□□□□ -0.4
TTC3-221ENST00000488522 GABREP78334 506 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 POM121L1PQ3SYA9 428 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 MIIPQ5JXC2 388 aa12.54□□□□□ -0.4
TTC3-221ENST00000488522 BRMS1LQ5PSV4 323 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms