RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 IL17RCQ8NAC3 791 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 TMEM145Q8NBT3 493 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 MDGA1Q8NFP4 955 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 TSTD1Q8NFU3 115 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 CLEC4CQ8WTT0 213 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 CCDC34Q96HJ3 373 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 DHTKD1Q96HY7 919 aaPredicted RBP6.18□□□□□ -1.42
CDHR3-213ENST00000488386 CEP295NLQ96MC4 621 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 MED15Q96RN5 788 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 DIRC2Q96SL1 478 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 PNKPQ96T60 521 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 ACOX2Q99424 681 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 CRACR2AQ9BSW2 395 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 IER2Q9BTL4 223 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 FAM126AQ9BYI3 521 aaPredicted RBP6.18□□□□□ -1.42
CDHR3-213ENST00000488386 SLC6A17Q9H1V8 727 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 FBXO44Q9H4M3 255 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 ACP6Q9NPH0 428 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 CD93Q9NPY3 652 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 SPHK2Q9NRA0 654 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 SEMA4GQ9NTN9 838 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.18□□□□□ -1.42
CDHR3-213ENST00000488386 SFMBT1Q9UHJ3 866 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 RAB23Q9ULC3 237 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 CLEC4EQ9ULY5 219 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 SCML2Q9UQR0 700 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 PCDHB4Q9Y5E5 795 aa6.18□□□□□ -1.42
CDHR3-213ENST00000488386 EP300Q09472 2414 aaPredicted RBP6.18□□□□□ -1.42
CDHR3-213ENST00000488386 DMXL1Q9Y485 3027 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 ABCA7Q8IZY2 2146 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 THADAQ6YHU6 1953 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 FRYLO94915 3013 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 TCRBV21S2A2A0A5A6 115 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 SLC12A8A0AV02 714 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 E2F8A0AVK6 867 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 TBC1D3BA6NDS4 549 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 WASH3PC4AMC7 463 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 PRRT4C9JH25 899 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 M0QYV0 167 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 SLC9A3R1O14745 358 aaPredicted RBP6.17□□□□□ -1.42
CDHR3-213ENST00000488386 STX10O60499 249 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 TSPAN3O60637 253 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 ATG13O75143 517 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 STC2O76061 302 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 TYRP14679 529 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 PFKLP17858 780 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 PAMP19021 973 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 CORO1AP31146 461 aaKnown RBP6.17□□□□□ -1.42
CDHR3-213ENST00000488386 NUMBP49757 651 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 TUBP50607 506 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 ATXN1P54253 815 aaKnown RBP6.17□□□□□ -1.42
CDHR3-213ENST00000488386 YWHAGP61981 247 aaKnown RBP eCLIP6.17□□□□□ -1.42
CDHR3-213ENST00000488386 GAD2Q05329 585 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 PAK1Q13153 545 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 STIM1Q13586 685 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 CRY1Q16526 586 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 RAB41Q5JT25 222 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 C10orf76Q5T2E6 689 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 EGFLAMQ63HQ2 1017 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 ARHGAP17Q68EM7 881 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 LAIR1Q6GTX8 287 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 OGFOD2Q6N063 350 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 SYT13Q7L8C5 426 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 CCDC186Q7Z3E2 898 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 DDX42Q86XP3 938 aaKnown RBP eCLIP6.17□□□□□ -1.42
CDHR3-213ENST00000488386 CACUL1Q86Y37 369 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 JAMLQ86YT9 394 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 DENND1CQ8IV53 801 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 ANKRD52Q8NB46 1076 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 LMO3Q8TAP4 145 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 HMGB4Q8WW32 186 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 GAB3Q8WWW8 586 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 UBXN4Q92575 508 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 SECISBP2LQ93073 1101 aaKnown RBP6.17□□□□□ -1.42
CDHR3-213ENST00000488386 NT5C1BQ96P26 610 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 BBS2Q9BXC9 721 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 INTS2Q9H0H0 1204 aaKnown RBP6.17□□□□□ -1.42
CDHR3-213ENST00000488386 OSBPL2Q9H1P3 480 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 FSCN3Q9NQT6 498 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 DNAJC17Q9NVM6 304 aaKnown RBP6.17□□□□□ -1.42
CDHR3-213ENST00000488386 COMMD8Q9NX08 183 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 TBC1D14Q9P2M4 693 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 HOOK1Q9UJC3 728 aaKnown RBP6.17□□□□□ -1.42
CDHR3-213ENST00000488386 AJAP1Q9UKB5 411 aaPredicted RBP6.17□□□□□ -1.42
CDHR3-213ENST00000488386 MMP17Q9ULZ9 603 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 COQ4Q9Y3A0 265 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 ATXN2Q99700 1313 aaKnown RBP6.17□□□□□ -1.42
CDHR3-213ENST00000488386 SPAG17Q6Q759 2223 aa6.17□□□□□ -1.42
CDHR3-213ENST00000488386 GOLGA6L7A0A1B0GV03 622 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 C7orf72A4D263 438 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 LRRC10BA6NIK2 292 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 YJEFN3A6XGL0 299 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 PATE3B3GLJ2 98 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 E7ENQ6 273 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 AGRPO00253 132 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 O00370 1275 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 XPO1O14980 1071 aaKnown RBP6.16□□□□□ -1.42
CDHR3-213ENST00000488386 HOXC11O43248 304 aaPredicted RBP6.16□□□□□ -1.42
CDHR3-213ENST00000488386 APBB3O95704 486 aa6.16□□□□□ -1.42
CDHR3-213ENST00000488386 RETP07949 1114 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms