RNA–Protein interactions for RNA: ENST00000488185.2

PKD1-221, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-221ENST00000488185 ZSCAN5CA6NGD5 496 aaPredicted RBP20.88■□□□□ 0.93
PKD1-221ENST00000488185 TMCO5BA8MYB1 307 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 VILLO15195 856 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 RAMP2O60895 175 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 CTSLP07711 333 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 CSNK1EP49674 416 aaKnown RBP20.88■□□□□ 0.93
PKD1-221ENST00000488185 METAP1P53582 386 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 CNTN1Q12860 1018 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 SCYL2Q6P3W7 929 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 LINGO4Q6UY18 593 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 TRIM69Q86WT6 500 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 UMODL1-AS1Q8N2C9 162 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 SNX19Q92543 992 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 EPAS1Q99814 870 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 HDAC8Q9BY41 377 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 TRIM5Q9C035 493 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 EBF2Q9HAK2 575 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 PREBQ9HCU5 417 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 MRPL47Q9HD33 250 aaKnown RBP20.88■□□□□ 0.93
PKD1-221ENST00000488185 SCINQ9Y6U3 715 aa20.88■□□□□ 0.93
PKD1-221ENST00000488185 CHD5Q8TDI0 1954 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 FGF10O15520 208 aaPredicted RBP20.87■□□□□ 0.93
PKD1-221ENST00000488185 KDELR3O43731 214 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 DFNA5O60443 496 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 SERPING1P05155 500 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 SKILP12757 684 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 EPHB2P29323 1055 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 HNRNPH3P31942 346 aaKnown RBP20.87■□□□□ 0.93
PKD1-221ENST00000488185 ACVRL1P37023 503 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 RECQLP46063 649 aaPredicted RBP20.87■□□□□ 0.93
PKD1-221ENST00000488185 ACAP1Q15027 740 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 POLD3Q15054 466 aaPredicted RBP20.87■□□□□ 0.93
PKD1-221ENST00000488185 KIF19Q2TAC6 998 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 HLA-BQ31612 363 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 PYROXD2Q8N2H3 581 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 ARFGAP1Q8N6T3 406 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 OR2I1PQ8NGU4 316 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 CASKIN2Q8WXE0 1202 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 LRIG1Q96JA1 1093 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 NOL6Q9H6R4 1146 aaKnown RBP20.87■□□□□ 0.93
PKD1-221ENST00000488185 CATSPERBQ9H7T0 1116 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 ARHGAP20Q9P2F6 1191 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 CNOT8Q9UFF9 292 aaKnown RBP20.87■□□□□ 0.93
PKD1-221ENST00000488185 DNAI1Q9UI46 699 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 HPCAL4Q9UM19 191 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 DMTF1Q9Y222 760 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 ANKRD6Q9Y2G4 727 aa20.87■□□□□ 0.93
PKD1-221ENST00000488185 LUC7L2Q9Y383 392 aaKnown RBP20.87■□□□□ 0.93
PKD1-221ENST00000488185 NYNRINQ9P2P1 1898 aaKnown RBP20.87■□□□□ 0.93
PKD1-221ENST00000488185 A0A1B0GVT2 93 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 FAM47DPA6NHR8 397 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 GIPC1O14908 333 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 PSMA2P25787 234 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 CTSKP43235 329 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 ZNF135P52742 658 aaPredicted RBP20.86■□□□□ 0.93
PKD1-221ENST00000488185 TAS2R38P59533 333 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 ZNF252P-AS1Q0IIN9 211 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 INO80DQ53TQ3 878 aaPredicted RBP20.86■□□□□ 0.93
PKD1-221ENST00000488185 CARD16Q5EG05 197 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 PIP5KL1Q5T9C9 394 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 DPY19L3Q6ZPD9 716 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 VPS36Q86VN1 386 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 DEFB124Q8NES8 71 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 SKA1Q96BD8 255 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 GAREM1Q9H706 876 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 IL36AQ9UHA7 158 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.86■□□□□ 0.933e-7■■■■□ 26.2
PKD1-221ENST00000488185 WASF2Q9Y6W5 498 aa20.86■□□□□ 0.93
PKD1-221ENST00000488185 TBC1D3DA0A087WVF3 549 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 TBC1D3IA0A087WXS9 549 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 TBC1D3EA0A087X179 549 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 TBC1D3KA0A087X1G2 549 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 TBC1D3FA6NER0 549 aaPredicted RBP20.85■□□□□ 0.93
PKD1-221ENST00000488185 TBC1D3LB9A6J9 549 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 RNF8O76064 485 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 GYPCP04921 128 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 TBC1D3HP0C7X1 549 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 PCK1P35558 622 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 ZNF423Q2M1K9 1284 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 PARP15Q460N3 678 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 ERMARDQ5T6L9 678 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 TBC1D3GQ6DHY5 549 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 TBC1D3CQ6IPX1 549 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 TBC1D3Q8IZP1 549 aaPredicted RBP20.85■□□□□ 0.93
PKD1-221ENST00000488185 CHST14Q8NCH0 376 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 HEPHQ9BQS7 1158 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 WASF3Q9UPY6 502 aa20.85■□□□□ 0.93
PKD1-221ENST00000488185 PCNX2A6NKB5 2137 aa20.84■□□□□ 0.93
PKD1-221ENST00000488185 A0A1W2PR77 199 aa20.84■□□□□ 0.93
PKD1-221ENST00000488185 GSRP00390 522 aa20.84■□□□□ 0.93
PKD1-221ENST00000488185 TPM1P09493 284 aa20.84■□□□□ 0.93
PKD1-221ENST00000488185 HCAR3P49019 387 aa20.84■□□□□ 0.93
PKD1-221ENST00000488185 OVGP1Q12889 678 aa20.84■□□□□ 0.93
PKD1-221ENST00000488185 ARSIQ5FYB1 569 aa20.84■□□□□ 0.93
PKD1-221ENST00000488185 CYP4V2Q6ZWL3 525 aaPredicted RBP20.84■□□□□ 0.93
PKD1-221ENST00000488185 ERN2Q76MJ5 926 aaKnown RBP20.84■□□□□ 0.93
PKD1-221ENST00000488185 GLRX5Q86SX6 157 aa20.84■□□□□ 0.93
PKD1-221ENST00000488185 PRPF39Q86UA1 669 aaKnown RBP20.84■□□□□ 0.93
PKD1-221ENST00000488185 IQCHQ86VS3 1027 aa20.84■□□□□ 0.93
PKD1-221ENST00000488185 VOPP1Q96AW1 172 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms