RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 FAM131BQ86XD5 332 aa13.98□□□□□ -0.17
COPS7B-221ENST00000488111 KATNAL2Q8IYT4 538 aa13.98□□□□□ -0.17
COPS7B-221ENST00000488111 CENPIQ92674 756 aaPredicted RBP13.98□□□□□ -0.17
COPS7B-221ENST00000488111 DGCR14Q96DF8 476 aaKnown RBP13.98□□□□□ -0.17
COPS7B-221ENST00000488111 SPATA17Q96L03 361 aa13.98□□□□□ -0.17
COPS7B-221ENST00000488111 NKX2-4Q9H2Z4 354 aa13.98□□□□□ -0.17
COPS7B-221ENST00000488111 C12orf65Q9H3J6 166 aaKnown RBP13.98□□□□□ -0.17
COPS7B-221ENST00000488111 TMPRSS4Q9NRS4 437 aa13.98□□□□□ -0.17
COPS7B-221ENST00000488111 STK39Q9UEW8 545 aa13.98□□□□□ -0.17
COPS7B-221ENST00000488111 STAP1Q9ULZ2 295 aa13.98□□□□□ -0.17
COPS7B-221ENST00000488111 SCML2Q9UQR0 700 aa13.98□□□□□ -0.17
COPS7B-221ENST00000488111 SSX2IPQ9Y2D8 614 aa13.98□□□□□ -0.17
COPS7B-221ENST00000488111 YIPF1Q9Y548 306 aa13.98□□□□□ -0.17
COPS7B-221ENST00000488111 PCDHA11Q9Y5I1 949 aa13.98□□□□□ -0.17
COPS7B-221ENST00000488111 CLUHO75153 1309 aa13.98□□□□□ -0.17
COPS7B-221ENST00000488111 C2orf71A6NGG8 1288 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 C5orf67F2Z3F1 127 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 LIASO43766 372 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 ETV4P43268 484 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 ALDH1A3P47895 512 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 SULT2A1Q06520 285 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 TWF1Q12792 350 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 RNASEH2BQ5TBB1 312 aaKnown RBP13.97□□□□□ -0.17
COPS7B-221ENST00000488111 DRICH1Q6PGQ1 229 aaPredicted RBP13.97□□□□□ -0.17
COPS7B-221ENST00000488111 CYP4V2Q6ZWL3 525 aaPredicted RBP13.97□□□□□ -0.17
COPS7B-221ENST00000488111 ALYREFQ86V81 257 aaKnown RBP13.97□□□□□ -0.17
COPS7B-221ENST00000488111 SCML4Q8N228 414 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 MRPL43Q8N983 215 aaKnown RBP13.97□□□□□ -0.17
COPS7B-221ENST00000488111 PIP4K2CQ8TBX8 421 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 NT5C3BQ969T7 300 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 PPP1R14BQ96C90 147 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 MTBPQ96DY7 904 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 CLPTM1LQ96KA5 538 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 CYTH2Q99418 400 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 S100A14Q9HCY8 104 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 SFMBT1Q9UHJ3 866 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 SHOC2Q9UQ13 582 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 LZTS1Q9Y250 596 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.97□□□□□ -0.17
COPS7B-221ENST00000488111 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.97□□□□□ -0.17
COPS7B-221ENST00000488111 ATP6V1G1O75348 118 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 OR6B1O95007 311 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 CD48P09326 243 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 EFTUD2Q15029 972 aaKnown RBP eCLIP13.97□□□□□ -0.17
COPS7B-221ENST00000488111 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.97□□□□□ -0.17
COPS7B-221ENST00000488111 SFT2D3Q587I9 215 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 C1QTNF12Q5T7M4 302 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 LRRC38Q5VT99 294 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 KLC3Q6P597 504 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 DHDDSQ86SQ9 333 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 MON1AQ86VX9 555 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 ALLCQ8N6M5 410 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 CCDC185Q8N715 623 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 NMD3Q96D46 503 aaKnown RBP13.97□□□□□ -0.17
COPS7B-221ENST00000488111 PIGVQ9NUD9 493 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 DDIT4Q9NX09 232 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 KCNK4Q9NYG8 393 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 IL37Q9NZH6 218 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 TAGLN3Q9UI15 199 aa13.97□□□□□ -0.17
COPS7B-221ENST00000488111 A0A0J9YVX5 310 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 SPECC1L-ADORA2AF8WAN1 911 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 ENO1P06733 434 aaKnown RBP13.96□□□□□ -0.17
COPS7B-221ENST00000488111 KRT7P08729 469 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 ZSCAN5DPP0CG00 497 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 SMIM18P0DKX4 95 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 KRT10P13645 584 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 CREMQ03060 361 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 GPM6BQ13491 265 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 DBN1Q16643 649 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 CA9Q16790 459 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 C1orf146Q5VVC0 180 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 KAZNQ674X7 775 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 MFSD7Q6UXD7 560 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 STRADAQ7RTN6 431 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 ARNTL2Q8WYA1 636 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 PRICKLE1Q96MT3 831 aaPredicted RBP13.96□□□□□ -0.17
COPS7B-221ENST00000488111 CATSPER2Q96P56 530 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 PAFAH2Q99487 392 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 THTPAQ9BU02 230 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 ABCC13Q9NSE7 274 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.96□□□□□ -0.17
COPS7B-221ENST00000488111 RHBDL2Q9NX52 303 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 CLIC5Q9NZA1 410 aa13.96□□□□□ -0.17
COPS7B-221ENST00000488111 FAM237BA0A1B0GVD1 139 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 NDC80O14777 642 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 KLF11O14901 512 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 VILLO15195 856 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 TBX18O95935 607 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 RB1P06400 928 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 ADH1AP07327 375 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 BGNP21810 368 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 PHBP35232 272 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 ARSEP51690 589 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 ERVK-21P61565 698 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 GPS1Q13098 491 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 TAF12Q16514 161 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 KLHL38Q2WGJ6 581 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 UGT2A3Q6UWM9 527 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 POLNQ7Z5Q5 900 aa13.96□□□□□ -0.18
COPS7B-221ENST00000488111 TAC4Q86UU9 113 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms