RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CCDC13Q8IYE1 715 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 SYCP3Q8IZU3 236 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 RBFAQ8N0V3 343 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 OR8D1Q8WZ84 308 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 DNAJC19Q96DA6 116 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 CYFIP2Q96F07 1278 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 CALML4Q96GE6 196 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 LRRC61Q9BV99 259 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 UNKQ9C0B0 810 aaKnown RBP11.99□□□□□ -0.49
TRIM56-204ENST00000487252 TCEAL2Q9H3H9 227 aaPredicted RBP11.99□□□□□ -0.49
TRIM56-204ENST00000487252 TBC1D7Q9P0N9 293 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 DAAM1Q9Y4D1 1078 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 KCNMB2Q9Y691 235 aa11.99□□□□□ -0.49
TRIM56-204ENST00000487252 GOLGA6L7A0A1B0GV03 622 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 MCF2LO15068 1137 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 RAD51BO15315 384 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 CCL4P13236 92 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 GAP43P17677 238 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 C16orf72Q14CZ0 275 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 SNRNP35Q16560 246 aaKnown RBP11.98□□□□□ -0.49
TRIM56-204ENST00000487252 DEFB109BQ30KR1 87 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 FOXD4L6Q3SYB3 417 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-204ENST00000487252 ZNF667Q5HYK9 610 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 SEL1L3Q68CR1 1132 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 PM20D1Q6GTS8 502 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 FOXD4L3Q6VB84 417 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-204ENST00000487252 SCARA5Q6ZMJ2 495 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 APCDD1Q8J025 514 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 KYQ8NBH2 561 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 HJURPQ8NCD3 748 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-204ENST00000487252 PMEPA1Q969W9 287 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 AZIN2Q96A70 460 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 MYEOVQ96EZ4 313 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 PDLIM2Q96JY6 352 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 KLF6Q99612 283 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-204ENST00000487252 DUSP16Q9BY84 665 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 SCAND2PQ9GZW5 306 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-204ENST00000487252 TSPY26PQ9H489 355 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 ZSCAN16Q9H4T2 348 aaPredicted RBP11.98□□□□□ -0.49
TRIM56-204ENST00000487252 OLA1Q9NTK5 396 aaKnown RBP11.98□□□□□ -0.49
TRIM56-204ENST00000487252 APOBEC3BQ9UH17 382 aaKnown RBP11.98□□□□□ -0.49
TRIM56-204ENST00000487252 APPL1Q9UKG1 709 aa11.98□□□□□ -0.49
TRIM56-204ENST00000487252 FRMD3A2A2Y4 597 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 C1QTNF3-AMACRE9PGA6 284 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 GABBR2O75899 941 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 SORBS2O94875 1100 aaKnown RBP11.97□□□□□ -0.49
TRIM56-204ENST00000487252 ANXA6P08133 673 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 PRR29P0C7W0 189 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 PRKAR1AP10644 381 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 TSHRP16473 764 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 PFN3P60673 137 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 RPS24P62847 133 aaKnown RBP11.97□□□□□ -0.49
TRIM56-204ENST00000487252 CYP24A1Q07973 514 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 MRPL49Q13405 166 aaKnown RBP11.97□□□□□ -0.49
TRIM56-204ENST00000487252 C1orf61Q13536 156 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 PDE1CQ14123 709 aaPredicted RBP11.97□□□□□ -0.49
TRIM56-204ENST00000487252 NAA30Q147X3 362 aaPredicted RBP11.97□□□□□ -0.49
TRIM56-204ENST00000487252 ZNF699Q32M78 642 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 EFHC2Q5JST6 749 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 RNF219Q5W0B1 726 aaPredicted RBP11.97□□□□□ -0.49
TRIM56-204ENST00000487252 LVRNQ6Q4G3 990 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 SPNS3Q6ZMD2 512 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 CACNA2D3Q8IZS8 1091 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 TTC13Q8NBP0 860 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 OR6C4Q8NGE1 309 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 PDCD6IPQ8WUM4 868 aaKnown RBP11.97□□□□□ -0.49
TRIM56-204ENST00000487252 TAAR9Q96RI9 348 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 TWNKQ96RR1 684 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 UBXN6Q9BZV1 441 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 SPRY4Q9C004 299 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 STIM2Q9P246 746 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 SFMBT1Q9UHJ3 866 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 RNF215Q9Y6U7 377 aa11.97□□□□□ -0.49
TRIM56-204ENST00000487252 MKRN2OSH3BPM6 223 aa11.96□□□□□ -0.49
TRIM56-204ENST00000487252 ATP9BO43861 1147 aa11.96□□□□□ -0.49
TRIM56-204ENST00000487252 LUC7L3O95232 432 aaKnown RBP11.96□□□□□ -0.49
TRIM56-204ENST00000487252 MOCS3O95396 460 aa11.96□□□□□ -0.49
TRIM56-204ENST00000487252 PDGFAP04085 211 aa11.96□□□□□ -0.49
TRIM56-204ENST00000487252 FGF3P11487 239 aaPredicted RBP11.96□□□□□ -0.49
TRIM56-204ENST00000487252 UBA7P41226 1012 aa11.96□□□□□ -0.49
TRIM56-204ENST00000487252 INCA1Q0VD86 236 aa11.96□□□□□ -0.49
TRIM56-204ENST00000487252 CDH18Q13634 790 aa11.96□□□□□ -0.49
TRIM56-204ENST00000487252 ZXDCQ2QGD7 858 aaPredicted RBP11.96□□□□□ -0.49
TRIM56-204ENST00000487252 ATL3Q6DD88 541 aa11.96□□□□□ -0.49
TRIM56-204ENST00000487252 NADSYN1Q6IA69 706 aa11.96□□□□□ -0.49
TRIM56-204ENST00000487252 CCNJLQ8IV13 435 aa11.96□□□□□ -0.49
TRIM56-204ENST00000487252 CCDC117Q8IWD4 279 aaPredicted RBP11.96□□□□□ -0.49
TRIM56-204ENST00000487252 PRR7Q8TB68 274 aa11.96□□□□□ -0.49
TRIM56-204ENST00000487252 ELMO3Q96BJ8 720 aa11.96□□□□□ -0.49
TRIM56-204ENST00000487252 CCDC127Q96BQ5 260 aa11.96□□□□□ -0.49
TRIM56-204ENST00000487252 LENG8Q96PV6 779 aaPredicted RBP11.96□□□□□ -0.49
TRIM56-204ENST00000487252 SLC17A9Q9BYT1 436 aa11.96□□□□□ -0.49
TRIM56-204ENST00000487252 KCTD3Q9Y597 815 aa11.96□□□□□ -0.49
TRIM56-204ENST00000487252 AGRPO00253 132 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 HGSO14964 777 aaPredicted RBP11.95□□□□□ -0.5
TRIM56-204ENST00000487252 MSI1O43347 362 aaKnown RBP11.95□□□□□ -0.5
TRIM56-204ENST00000487252 ACSL4O60488 711 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 RAD1O60671 282 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 VNN1O95497 513 aa11.95□□□□□ -0.5
TRIM56-204ENST00000487252 CTSLP07711 333 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms