RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 PATJQ8NI35 1801 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 ATP9BO43861 1147 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 TRIM13O60858 407 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 ANXA9O76027 345 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 CRABP2P29373 138 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 TM4SF4P48230 202 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 SLC25A3Q00325 362 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 CACNB2Q08289 660 aaPredicted RBP26.53■■□□□ 1.84
HLA-C-208ENST00000487245 ATPAF2Q8N5M1 289 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 SCAMP5Q8TAC9 235 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 FCRL5Q96RD9 977 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 AGAP2Q99490 1192 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 KIFC1Q9BW19 673 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 S100A14Q9HCY8 104 aa26.53■■□□□ 1.84
HLA-C-208ENST00000487245 C20orf96Q9NUD7 363 aaPredicted RBP26.53■■□□□ 1.84
HLA-C-208ENST00000487245 HSPA4LO95757 839 aa26.52■■□□□ 1.84
HLA-C-208ENST00000487245 C2P06681 752 aa26.52■■□□□ 1.84
HLA-C-208ENST00000487245 HSP90AA5PQ58FG0 334 aa26.52■■□□□ 1.84
HLA-C-208ENST00000487245 CCSAPQ6IQ19 270 aaPredicted RBP26.52■■□□□ 1.84
HLA-C-208ENST00000487245 LRRC49Q8IUZ0 686 aa26.52■■□□□ 1.84
HLA-C-208ENST00000487245 HASPINQ8TF76 798 aa26.52■■□□□ 1.84
HLA-C-208ENST00000487245 GATA6Q92908 595 aa26.52■■□□□ 1.84
HLA-C-208ENST00000487245 SIK2Q9H0K1 926 aa26.52■■□□□ 1.84
HLA-C-208ENST00000487245 NMRAL1Q9HBL8 299 aa26.52■■□□□ 1.84
HLA-C-208ENST00000487245 NEU3Q9UQ49 428 aa26.52■■□□□ 1.84
HLA-C-208ENST00000487245 NOD1Q9Y239 953 aa26.52■■□□□ 1.84
HLA-C-208ENST00000487245 PTPRDP23468 1912 aa26.52■■□□□ 1.84
HLA-C-208ENST00000487245 MAGEA13PA6NCF6 341 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 TNFRSF10BO14763 440 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 SKAP2O75563 359 aaPredicted RBP26.51■■□□□ 1.83
HLA-C-208ENST00000487245 GRIK1P39086 918 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 PSEN1P49768 467 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 SLC5A3P53794 718 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 YWHAHQ04917 246 aaPredicted RBP26.51■■□□□ 1.83
HLA-C-208ENST00000487245 MANEALQ5VSG8 457 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 CCDC117Q8IWD4 279 aaPredicted RBP26.51■■□□□ 1.83
HLA-C-208ENST00000487245 MFSD3Q96ES6 412 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 GPR22Q99680 433 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 FAM155AB1AL88 458 aaPredicted RBP26.51■■□□□ 1.83
HLA-C-208ENST00000487245 DFFAO00273 331 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 PAGE1O75459 146 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 NEBLO76041 1014 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 SP100P23497 879 aaPredicted RBP26.51■■□□□ 1.83
HLA-C-208ENST00000487245 NRG1Q02297 640 aaPredicted RBP26.51■■□□□ 1.83
HLA-C-208ENST00000487245 TRIM71Q2Q1W2 868 aaKnown RBP26.51■■□□□ 1.83
HLA-C-208ENST00000487245 TIGD7Q6NT04 549 aaPredicted RBP26.51■■□□□ 1.83
HLA-C-208ENST00000487245 ARHGAP12Q8IWW6 846 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 CNTD1Q8N815 330 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 UCMAQ8WVF2 138 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 VPS39Q96JC1 886 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 IL12RB2Q99665 862 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 COG4Q9H9E3 785 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 CHRAC1Q9NRG0 131 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 OXSMQ9NWU1 459 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 FNIP2Q9P278 1114 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 SCOCQ9UIL1 159 aa26.51■■□□□ 1.83
HLA-C-208ENST00000487245 MATN3O15232 486 aa26.5■■□□□ 1.83
HLA-C-208ENST00000487245 BUD23O43709 281 aaKnown RBP26.5■■□□□ 1.83
HLA-C-208ENST00000487245 GEMP55040 296 aa26.5■■□□□ 1.83
HLA-C-208ENST00000487245 ANO4Q32M45 955 aa26.5■■□□□ 1.83
HLA-C-208ENST00000487245 NAPRTQ6XQN6 538 aa26.5■■□□□ 1.83
HLA-C-208ENST00000487245 POU5F2Q8N7G0 328 aa26.5■■□□□ 1.83
HLA-C-208ENST00000487245 ZNF781Q8N8C0 355 aa26.5■■□□□ 1.83
HLA-C-208ENST00000487245 AZIN2Q96A70 460 aa26.5■■□□□ 1.83
HLA-C-208ENST00000487245 ARHGAP39Q9C0H5 1083 aa26.5■■□□□ 1.83
HLA-C-208ENST00000487245 GLOD4Q9HC38 313 aa26.5■■□□□ 1.83
HLA-C-208ENST00000487245 NMRK2Q9NPI5 230 aa26.5■■□□□ 1.83
HLA-C-208ENST00000487245 PPM1HQ9ULR3 514 aa26.5■■□□□ 1.83
HLA-C-208ENST00000487245 NLRC5Q86WI3 1866 aa26.5■■□□□ 1.83
HLA-C-208ENST00000487245 NUP205Q92621 2012 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 SHROOM3Q8TF72 1996 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 CABYRO75952 493 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 EOMESO95936 686 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 ITGAXP20702 1163 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 GLDCP23378 1020 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 YY1P25490 414 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 GMPRP36959 345 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 POLD2P49005 469 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 DSG1Q02413 1049 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 PCID2Q5JVF3 399 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 VWA5B1Q5TIE3 1220 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 ZYG11AQ6WRX3 759 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 DCP1BQ8IZD4 617 aaKnown RBP26.49■■□□□ 1.83
HLA-C-208ENST00000487245 TNS4Q8IZW8 715 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 PGLYRP2Q96PD5 576 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 TBL1YQ9BQ87 522 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 ECSITQ9BQ95 431 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 RTKNQ9BST9 563 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 CDH22Q9UJ99 828 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 COX4I1P13073 169 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 TUBP50607 506 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 IRF9Q00978 393 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 OR52E8Q6IFG1 317 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 GLB1LQ6UWU2 654 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 OTOP3Q7RTS5 596 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 PTCD2Q8WV60 388 aaKnown RBP26.49■■□□□ 1.83
HLA-C-208ENST00000487245 FCRL2Q96LA5 508 aaPredicted RBP26.49■■□□□ 1.83
HLA-C-208ENST00000487245 APOL2Q9BQE5 337 aa26.49■■□□□ 1.83
HLA-C-208ENST00000487245 LBHD1Q9BQE6 289 aaPredicted RBP26.49■■□□□ 1.83
HLA-C-208ENST00000487245 GATA5Q9BWX5 397 aaPredicted RBP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms