RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 SIK2Q9H0K1 926 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 OSBPL2Q9H1P3 480 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 USP29Q9HBJ7 922 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 ASCL3Q9NQ33 180 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 GPR27Q9NS67 375 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 DNAJC28Q9NX36 388 aa19.9■□□□□ 0.78
SMPDL3A-202ENST00000487215 BICDL2A1A5D9 508 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 NEMP2A6NFY4 417 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 A6NNZ2 444 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 J3QKU1 62 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 DAB1O75553 588 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 NEBLO76041 1014 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 GNA14O95837 355 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 DUSP3P51452 185 aaPredicted RBP19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 ARSIQ5FYB1 569 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 OLFML1Q6UWY5 402 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 C11orf57Q6ZUT1 292 aaPredicted RBP19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 PTAR1Q7Z6K3 402 aaPredicted RBP19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 IFI44Q8TCB0 444 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 GRIN3AQ8TCU5 1115 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 MAPK15Q8TD08 544 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 WBP1Q96G27 269 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 BMFQ96LC9 184 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 DUSP23Q9BVJ7 150 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 HDAC8Q9BY41 377 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 ABCG4Q9H172 646 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 ANLNQ9NQW6 1124 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 EVA1BQ9NVM1 165 aa19.89■□□□□ 0.77
SMPDL3A-202ENST00000487215 ATMQ13315 3056 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 M0QYT0 321 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 KLK10O43240 276 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 LZTS3O60299 673 aaPredicted RBP19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 ERBB2P04626 1255 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 USP8P40818 1118 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 CLCN6P51797 869 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 STX17P56962 302 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 HNRNPKP61978 463 aaKnown RBP eCLIP19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 C22orf39Q6P5X5 142 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 LINGO4Q6UY18 593 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 KYAT3Q6YP21 454 aaKnown RBP19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 DCP2Q8IU60 420 aaKnown RBP19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 ZNF683Q8IZ20 524 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 DCAF4L2Q8NA75 395 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 C1orf131Q8NDD1 294 aaKnown RBP19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 ZNF548Q8NEK5 533 aaPredicted RBP19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 FAM174AQ8TBP5 190 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 VCPIP1Q96JH7 1222 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 SEMA4CQ9C0C4 833 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 TNKS2Q9H2K2 1166 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 THSD1Q9NS62 852 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 PIGVQ9NUD9 493 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 IL36AQ9UHA7 158 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 SNX10Q9Y5X0 201 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 TENM4Q6N022 2769 aa19.88■□□□□ 0.77
SMPDL3A-202ENST00000487215 A0A0D9SEW6 157 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 POM121BA6NF01 834 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 I6L893 689 aaPredicted RBP19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 LEFTY1O75610 366 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 ADCY5O95622 1261 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 NOS2P35228 1153 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 FGL2Q14314 439 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 FZD2Q14332 565 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 ARHGAP44Q17R89 818 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 ISXQ2M1V0 245 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 TRIM65Q6PJ69 517 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 DPY19L3Q6ZPD9 716 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 SLC26A9Q7LBE3 791 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 SETD3Q86TU7 594 aaPredicted RBP19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 PPP1R16AQ96I34 528 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 CRACR2AQ9BSW2 395 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 SLC17A9Q9BYT1 436 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 DPH1Q9BZG8 443 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 TKTL2Q9H0I9 626 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 ARHGEF38Q9NXL2 777 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 PCDHGC3Q9UN70 934 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 HS3ST3A1Q9Y663 406 aa19.87■□□□□ 0.77
SMPDL3A-202ENST00000487215 A0A1W2PNU3 283 aaPredicted RBP19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 RAD51BO15315 384 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 ENDOD1O94919 500 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 CSF2P04141 144 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 NME1P15531 152 aaKnown RBP19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 TFE3P19532 575 aaPredicted RBP19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 TGM2P21980 687 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 NEK3P51956 506 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 SLC6A3Q01959 620 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 APBA1Q02410 837 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 MAPK8IP2Q13387 824 aaPredicted RBP19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 PTPN20Q4JDL3 420 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 C3orf38Q5JPI3 329 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 BRMS1LQ5PSV4 323 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 ZCCHC8Q6NZY4 707 aaKnown RBP19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 IGF2-ASQ6U949 168 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 TFAP2DQ7Z6R9 452 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 TTC9Q92623 222 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 NPY6RQ99463 290 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 SRRTQ9BXP5 876 aaKnown RBP19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 SATB2Q9UPW6 733 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 WASF2Q9Y6W5 498 aa19.86■□□□□ 0.77
SMPDL3A-202ENST00000487215 SPTY2D1-AS1A0A0U1RR47 76 aa19.85■□□□□ 0.77
SMPDL3A-202ENST00000487215 DRGXA6NNA5 263 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms