RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 ACTR2P61160 394 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 IFRD2Q12894 506 aaPredicted RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 RPS6KA2Q15349 733 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SF3B4Q15427 424 aaKnown RBP eCLIP6.33□□□□□ -1.44e-7■■■■■ 32.4
VPS13D-209ENST00000487188 STILQ15468 1287 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 IQSEC1Q6DN90 963 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 PPP4R4Q6NUP7 873 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 CDC42EP5Q6NZY7 148 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 CRTC3Q6UUV7 619 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 EEPD1Q7L9B9 569 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ERMP1Q7Z2K6 904 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ZBTB33Q86T24 672 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ERO1BQ86YB8 467 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 CCDC103Q8IW40 242 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ANKRD13AQ8IZ07 590 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 PACRGLQ8N7B6 248 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 CANT1Q8WVQ1 401 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 TFAP2CQ92754 450 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 GMCL1Q96IK5 515 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 RNF157Q96PX1 679 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ACE2Q9BYF1 805 aaPredicted RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ZC3H12CQ9C0D7 883 aaKnown RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 TRPV5Q9NQA5 729 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ANKEF1Q9NU02 776 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 IFT80Q9P2H3 777 aaPredicted RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 PRELID1Q9Y255 219 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 COPG1Q9Y678 874 aaKnown RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 C3orf70A6NLC5 250 aaPredicted RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 K7ERI5 159 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SNPHO15079 494 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 UBDO15205 165 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 CAPN15O75808 1086 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 TNNC2P02585 160 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 C4BPAP04003 597 aaKnown RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 CAPGP40121 348 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 GRIA1P42261 906 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 NKX2-5P52952 324 aaPredicted RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 TMBIM6P55061 237 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 FSTL1Q12841 308 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SLC10A2Q12908 348 aaPredicted RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 TRIM32Q13049 653 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ORC1Q13415 861 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 RFTN1Q14699 578 aaPredicted RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ANO4Q32M45 955 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ARL13AQ5H913 290 aaPredicted RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 GRTP1Q5TC63 336 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 REP15Q6BDI9 236 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 JADE1Q6IE81 842 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SLC39A4Q6P5W5 647 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 CDR2LQ86X02 465 aaPredicted RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 PEX5LQ8IYB4 626 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 HACE1Q8IYU2 909 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 CADM3Q8N126 398 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 CCNYQ8ND76 341 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SHCBP1Q8NEM2 672 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SUN5Q8TC36 379 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 TOP1MTQ969P6 601 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SIGLEC10Q96LC7 697 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ALPK1Q96QP1 1244 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 CPNE1Q99829 537 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 SH3GL1Q99961 368 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 MOV10Q9HCE1 1003 aaKnown RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 ZBTB26Q9HCK0 441 aa6.33□□□□□ -1.4
VPS13D-209ENST00000487188 IPO11Q9UI26 975 aaKnown RBP6.33□□□□□ -1.4
VPS13D-209ENST00000487188 C9IYK1 514 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 EI24O14681 340 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 DYNC1LI2O43237 492 aaPredicted RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 VNN1O95497 513 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 MPOP05164 745 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 GSNP06396 782 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 FCGR1AP12314 374 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 TFEBP19484 476 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 TPSB2P20231 275 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 PROZP22891 400 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 CCND2P30279 289 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 HOXD11P31277 338 aaPredicted RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 SLC12A2P55011 1212 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 MYL6P60660 151 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 TRAP1Q12931 704 aaKnown RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 TPSAB1Q15661 275 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 UGCGQ16739 394 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 EML3Q32P44 896 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 ZIK1Q3SY52 487 aaPredicted RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 PITRM1Q5JRX3 1037 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 ZBTB41Q5SVQ8 909 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 OTUD3Q5T2D3 398 aaPredicted RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 CCNYL2Q5T2Q4 361 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 TMTC4Q5T4D3 741 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 ANKRD13BQ86YJ7 626 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 DDIASQ8IXT1 998 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 CLEC4FQ8N1N0 589 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 OR5B17Q8NGF7 314 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 PSMA8Q8TAA3 256 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 PNPT1Q8TCS8 783 aaKnown RBP6.32□□□□□ -1.4
VPS13D-209ENST00000487188 BSNDQ8WZ55 320 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 FBXL18Q96ME1 805 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 NAT9Q9BTE0 207 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 CAB39LQ9H9S4 337 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 ABCB10Q9NRK6 738 aa6.32□□□□□ -1.4
VPS13D-209ENST00000487188 MRGBPQ9NV56 204 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms