RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 KRT84Q9NSB2 600 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 IL1RAPL1Q9NZN1 696 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 PEMTQ9UBM1 199 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 ZNHIT2Q9UHR6 403 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 IPO11Q9UI26 975 aaKnown RBP5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 SLC8A2Q9UPR5 921 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 ICKQ9UPZ9 632 aa5.34□□□□□ -1.55
PRPF38A-203ENST00000487160 FRMPD1Q5SYB0 1578 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 CD109Q6YHK3 1445 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 CYP2D7A0A087X1C5 515 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 PI4KAP2A4QPH2 592 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 MSI1O43347 362 aaKnown RBP5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 TNFSF14O43557 240 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 CEP104O60308 925 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 PROP1O75360 226 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 COX7A2P14406 83 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 TFEBP19484 476 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 CHMP24386 653 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 KLRC2P26717 231 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 CHRNA5P30532 468 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 RGS2P41220 211 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 STAT1P42224 750 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 SKIV2L2P42285 1042 aaKnown RBP5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 CYP2J2P51589 502 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 ZNF268Q14587 947 aaPredicted RBP5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 PLK5Q496M5 336 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 EARS2Q5JPH6 523 aaKnown RBP5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 VWA5B1Q5TIE3 1220 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 ITPRIPL1Q6GPH6 555 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 C17orf99Q6UX52 265 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 B4GALNT4Q76KP1 1039 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 CNTROBQ8N137 903 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 CPXM2Q8N436 756 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 DNAAF1Q8NEP3 725 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 SEMA6DQ8NFY4 1073 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 NOC3LQ8WTT2 800 aaKnown RBP5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 CUL5Q93034 780 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 NR1H4Q96RI1 486 aaPredicted RBP5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 ZNF304Q9HCX3 659 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 TBC1D14Q9P2M4 693 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 SIGLEC1Q9BZZ2 1709 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 ARAP3Q8WWN8 1544 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 UGGT2Q9NYU1 1516 aa5.33□□□□□ -1.56
PRPF38A-203ENST00000487160 KIF27Q86VH2 1401 aa5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 PREX1Q8TCU6 1659 aa5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 TEX13CA0A0J9YWL9 993 aa5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 C17orf113A0A1B0GUU1 675 aa5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 PABPN1LA6NDY0 278 aaKnown RBP5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 TMEM247A6NEH6 219 aa5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 ZBED4O75132 1171 aa5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 USP12O75317 370 aa5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 HSPA1AP0DMV8 641 aaKnown RBP5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 HSPA1BP0DMV9 641 aaKnown RBP5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 SETQ01105 290 aaPredicted RBP5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 DCTN2Q13561 401 aaKnown RBP5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 TMEM268Q5VZI3 342 aa5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 ZNF782Q6ZMW2 699 aaPredicted RBP5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 DBX2Q6ZNG2 339 aa5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 KRTAP1-3Q8IUG1 177 aa5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 ADGRF4Q8IZF3 695 aa5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 IFT27Q9BW83 186 aa5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 SCNM1Q9BWG6 230 aa5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 PSAT1Q9Y617 370 aa5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 PIAS3Q9Y6X2 628 aa5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 SETD1BQ9UPS6 1966 aaKnown RBP5.32□□□□□ -1.56
PRPF38A-203ENST00000487160 RICTORQ6R327 1708 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 ABCA9Q8IUA7 1624 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 ABCA8O94911 1581 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 A0A0A0MQY5 61 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 FSD2A1L4K1 749 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 ANKRD18BA2A2Z9 1011 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 DYTNA2CJ06 578 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 NPIPB15A6NHN6 443 aaPredicted RBP5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 MANSC4A6NHS7 340 aaPredicted RBP5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 C2CD4BA6NLJ0 364 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 CYR61O00622 381 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 TGFB1I1O43294 461 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 GFPT2O94808 682 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 DDAH2O95865 285 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 ADAP00813 363 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 SERPINC1P01008 464 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 CLEC3BP05452 202 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 CD63P08962 238 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 ABCD1P33897 745 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 SLC12A2P55011 1212 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 PROK1P58294 105 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 RPS3AP61247 264 aaKnown RBP5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 HSF1Q00613 529 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 NEXNQ0ZGT2 675 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 RPE65Q16518 533 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 SNX30Q5VWJ9 437 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 TTLL5Q6EMB2 1281 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 FBXO42Q6P3S6 717 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 TMEM81Q6P7N7 255 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 LRIG3Q6UXM1 1119 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 ZNF788Q6ZQV5 615 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 CYB5R4Q7L1T6 521 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 CCDC25Q86WR0 208 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 NGEFQ8N5V2 710 aa5.31□□□□□ -1.56
PRPF38A-203ENST00000487160 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms