RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CYP1B1Q16678 543 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 RSPO4Q2I0M5 234 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-229ENST00000486665 ZNF528Q3MIS6 628 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 SLC45A4Q5BKX6 768 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 EMC10Q5UCC4 262 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 FSTL4Q6MZW2 842 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 DARS2Q6PI48 645 aaKnown RBP13.03□□□□□ -0.32
HDAC6-229ENST00000486665 ZNF572Q7Z3I7 529 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-229ENST00000486665 LRRC49Q8IUZ0 686 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 CCDC13Q8IYE1 715 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 AHI1Q8N157 1196 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 C12orf50Q8NA57 414 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-229ENST00000486665 DCAF4L2Q8NA75 395 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 SPATA4Q8NEY3 305 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 CYB5D2Q8WUJ1 264 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 TFB1MQ8WVM0 346 aaKnown RBP13.03□□□□□ -0.32
HDAC6-229ENST00000486665 NELL1Q92832 810 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 MAGOHBQ96A72 148 aaKnown RBP13.03□□□□□ -0.32
HDAC6-229ENST00000486665 CLDN23Q96B33 292 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 QKIQ96PU8 341 aaKnown RBP eCLIP13.03□□□□□ -0.32
HDAC6-229ENST00000486665 FRMD8P1Q9BZ68 369 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-229ENST00000486665 OSBPL6Q9BZF3 934 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 BRD8Q9H0E9 1235 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 USP29Q9HBJ7 922 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 RBM12Q9NTZ6 932 aaKnown RBP13.03□□□□□ -0.32
HDAC6-229ENST00000486665 ELOVL2Q9NXB9 296 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 DLL3Q9NYJ7 618 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 DRG1Q9Y295 367 aaKnown RBP13.03□□□□□ -0.32
HDAC6-229ENST00000486665 NUP205Q92621 2012 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 BCLAF3A2AJT9 711 aaKnown RBP13.02□□□□□ -0.33
HDAC6-229ENST00000486665 K7ERQ8 282 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 KCNK1O00180 336 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 MATN3O15232 486 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 TIMM44O43615 452 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 PHF2O75151 1096 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 EGFP01133 1207 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 COILP38432 576 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-229ENST00000486665 STK19P49842 368 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-229ENST00000486665 CLCN6P51797 869 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 ECT2LQ008S8 904 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 C2orf54Q08AI8 447 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 BYSLQ13895 437 aaKnown RBP13.02□□□□□ -0.33
HDAC6-229ENST00000486665 CYTH1Q15438 398 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 TMEM196Q5HYL7 178 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 DRICH1Q6PGQ1 229 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-229ENST00000486665 ZBTB44Q8NCP5 570 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 USP33Q8TEY7 942 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 FAM3CQ92520 227 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 MAML1Q92585 1016 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 ACDQ96AP0 544 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 RPL10LQ96L21 214 aaKnown RBP13.02□□□□□ -0.33
HDAC6-229ENST00000486665 MRGPRX3Q96LB0 322 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 TMEM121Q9BTD3 319 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 C2orf49Q9BVC5 232 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-229ENST00000486665 CIPCQ9C0C6 399 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 DDX47Q9H0S4 455 aaKnown RBP13.02□□□□□ -0.33
HDAC6-229ENST00000486665 L2HGDHQ9H9P8 463 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 SP110Q9HB58 689 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 HOMER3Q9NSC5 361 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 SLCO3A1Q9UIG8 710 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 FBXO4Q9UKT5 387 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 HPCAL4Q9UM19 191 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 ERVW-1Q9UQF0 538 aa13.02□□□□□ -0.33
HDAC6-229ENST00000486665 EPG5Q9HCE0 2579 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 GOLGA6L10A0A0M3HER8 536 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 SMAD6O43541 496 aaKnown RBP13.01□□□□□ -0.33
HDAC6-229ENST00000486665 LILRB5O75023 590 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 JCHAINP01591 159 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 CHRM1P11229 460 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-229ENST00000486665 TDGF1P13385 188 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 TGM1P22735 817 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 TNFRSF4P43489 277 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 GDF10P55107 478 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 ZNF33AQ06730 810 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 CKAP4Q07065 602 aaKnown RBP13.01□□□□□ -0.33
HDAC6-229ENST00000486665 SLC10A7Q0GE19 358 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 WASHC5Q12768 1159 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 MTAPQ13126 283 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 PTPRNQ16849 979 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 PREPLQ4J6C6 727 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-229ENST00000486665 PRUNE1Q86TP1 453 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 CDKL3Q8IVW4 592 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-229ENST00000486665 KLHL7Q8IXQ5 586 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 TEX26Q8N6G2 289 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 FAM71DQ8N9W8 422 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 HTR3CQ8WXA8 447 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 FATE1Q969F0 183 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 MSANTD3Q96H12 275 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 MYO19Q96H55 970 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 ZNF419Q96HQ0 510 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-229ENST00000486665 CARD6Q9BX69 1037 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 CEP41Q9BYV8 373 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 ZDHHC4Q9NPG8 344 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 PRMT8Q9NR22 394 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-229ENST00000486665 SEPT10Q9P0V9 454 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 UBA2Q9UBT2 640 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-229ENST00000486665 ZNF148Q9UQR1 794 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 STARD13Q9Y3M8 1113 aa13.01□□□□□ -0.33
HDAC6-229ENST00000486665 NYNRINQ9P2P1 1898 aaKnown RBP13.01□□□□□ -0.33
HDAC6-229ENST00000486665 KMT2BQ9UMN6 2715 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms