RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 NMBRP28336 390 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 RFC2P35250 354 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 MAGEA12P43365 314 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 SERPINB8P50452 374 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 OVGP1Q12889 678 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 MPP3Q13368 585 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 HSP90AA5PQ58FG0 334 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 NLRP9Q7RTR0 991 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 PACS2Q86VP3 889 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 ERP27Q96DN0 273 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 C7orf26Q96N11 449 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 CCSER2Q9H7U1 834 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 HBS1LQ9Y450 684 aaKnown RBP20.69■□□□□ 0.9
HPS3-206ENST00000486530 TIMM44O43615 452 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 RASSF9O75901 435 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 HMBSP08397 361 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 ITGB8P26012 769 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 TYK2P29597 1187 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 TMPRSS15P98073 1019 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 SPDYAQ5MJ70 313 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 ARMC3Q5W041 872 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 DENND5AQ6IQ26 1287 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 PKN3Q6P5Z2 889 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 POTEHQ6S545 545 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 DCLK2Q8N568 766 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 PPHLN1Q8NEY8 458 aaKnown RBP20.69■□□□□ 0.9
HPS3-206ENST00000486530 IGSF8Q969P0 613 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 AGAP2Q99490 1192 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 SLC25A51Q9H1U9 297 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 SP110Q9HB58 689 aa20.69■□□□□ 0.9
HPS3-206ENST00000486530 MRM3Q9HC36 420 aaKnown RBP20.69■□□□□ 0.9
HPS3-206ENST00000486530 TUFMP49411 452 aaKnown RBP20.68■□□□□ 0.9
HPS3-206ENST00000486530 CHI3L2Q15782 390 aa20.68■□□□□ 0.9
HPS3-206ENST00000486530 N4BP2L1Q5TBK1 243 aaPredicted RBP20.68■□□□□ 0.9
HPS3-206ENST00000486530 RNF168Q8IYW5 571 aaPredicted RBP20.68■□□□□ 0.9
HPS3-206ENST00000486530 PDZD8Q8NEN9 1154 aa20.68■□□□□ 0.9
HPS3-206ENST00000486530 RFWD2Q8NHY2 731 aa20.68■□□□□ 0.9
HPS3-206ENST00000486530 OVCA2Q8WZ82 227 aa20.68■□□□□ 0.9
HPS3-206ENST00000486530 RPRD1AQ96P16 312 aaPredicted RBP20.68■□□□□ 0.9
HPS3-206ENST00000486530 CWH43Q9H720 699 aa20.68■□□□□ 0.9
HPS3-206ENST00000486530 SNX15Q9NRS6 342 aa20.68■□□□□ 0.9
HPS3-206ENST00000486530 TXLNGQ9NUQ3 528 aa20.68■□□□□ 0.9
HPS3-206ENST00000486530 ZNF212Q9UDV6 495 aa20.68■□□□□ 0.9
HPS3-206ENST00000486530 HGSO14964 777 aaPredicted RBP20.67■□□□□ 0.9
HPS3-206ENST00000486530 ADAM12O43184 909 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 TOP3BO95985 862 aaKnown RBP20.67■□□□□ 0.9
HPS3-206ENST00000486530 MAPKAPK2P49137 400 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 BST1Q10588 318 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 PARP15Q460N3 678 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 FSTL4Q6MZW2 842 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 NSMCE1Q8WV22 266 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 MRGPRX2Q96LB1 330 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 IARS2Q9NSE4 1012 aaKnown RBP20.67■□□□□ 0.9
HPS3-206ENST00000486530 DCTN4Q9UJW0 460 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 EMCNQ9ULC0 261 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 COL4A6Q14031 1691 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 TRIM43BA6NCK2 446 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 PLIN3O60664 434 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 PMPCBO75439 489 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 ATP5HO75947 161 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 HADHAP40939 763 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 TNK2Q07912 1038 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 MARC1Q5VT66 337 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 RANBP10Q6VN20 620 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 CCDC91Q7Z6B0 441 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 TRIM43Q96BQ3 446 aaPredicted RBP20.67■□□□□ 0.9
HPS3-206ENST00000486530 IMP4Q96G21 291 aaKnown RBP20.67■□□□□ 0.9
HPS3-206ENST00000486530 IGSF21Q96ID5 467 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 MCMBPQ9BTE3 642 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 DNMT3LQ9UJW3 386 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 MTO1Q9Y2Z2 717 aaKnown RBP20.67■□□□□ 0.9
HPS3-206ENST00000486530 TCAF1Q9Y4C2 921 aa20.67■□□□□ 0.9
HPS3-206ENST00000486530 LTBP2Q14767 1821 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 CHD5Q8TDI0 1954 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 J3KR12 359 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 RAMP2O60895 175 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 UNC5CO95185 931 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 TIMP1P01033 207 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 MPOP05164 745 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 OR1D2P34982 312 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 ARFIP2P53365 341 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 YBEYP58557 167 aaPredicted RBP20.66■□□□□ 0.9
HPS3-206ENST00000486530 OCRLQ01968 901 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 POU6F1Q14863 301 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 KDELC1Q6UW63 502 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 TEX26Q8N6G2 289 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 TOP1MTQ969P6 601 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 NT5MQ9NPB1 228 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 VPS45Q9NRW7 570 aa20.66■□□□□ 0.9
HPS3-206ENST00000486530 A0A0G2JND7 137 aa20.65■□□□□ 0.9
HPS3-206ENST00000486530 CCDC195A0A1B0GUA6 201 aa20.65■□□□□ 0.9
HPS3-206ENST00000486530 ABHD14A-ACY1A0A1B0GW23 586 aa20.65■□□□□ 0.9
HPS3-206ENST00000486530 SNNO75324 88 aaPredicted RBP20.65■□□□□ 0.9
HPS3-206ENST00000486530 DLDP09622 509 aaKnown RBP20.65■□□□□ 0.9
HPS3-206ENST00000486530 TACR2P21452 398 aa20.65■□□□□ 0.9
HPS3-206ENST00000486530 ATP5C1P36542 298 aaKnown RBP20.65■□□□□ 0.9
HPS3-206ENST00000486530 WNT3AP56704 352 aa20.65■□□□□ 0.9
HPS3-206ENST00000486530 POLD3Q15054 466 aaPredicted RBP20.65■□□□□ 0.9
HPS3-206ENST00000486530 FASTKD1Q53R41 847 aaKnown RBP20.65■□□□□ 0.9
HPS3-206ENST00000486530 SNX30Q5VWJ9 437 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms