RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550		Q6ZVU0	165 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	SLC26A9	Q7LBE3	791 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	PHLDB2	Q86SQ0	1253 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	TMEM35B	Q8NCS4	154 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	ZNF248	Q8NDW4	579 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	TSC1	Q92574	1164 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	SERAC1	Q96JX3	654 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	SPAG5	Q96R06	1193 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	TBCB	Q99426	244 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	NPY6R	Q99463	290 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	MUC3B	Q9H195	1237 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	WDCP	Q9H6R7	721 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550	SLC25A13	Q9UJS0	675 aa		10.85	□□□□□ -0.67
HMGN1-215	ENST00000485550		A0A1W2PR77	199 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	GOLGA8S	H3BPF8	625 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550		K7ERQ8	282 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	ATP9B	O43861	1147 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	SNAP91	O60641	907 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	SRGAP2	O75044	1071 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	CLDN11	O75508	207 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	WISP1	O95388	367 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	C6	P13671	934 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	EPHA8	P29322	1005 aa	Predicted RBP	10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	CCR5	P51681	352 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	CDH4	P55283	916 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	OXCT1	P55809	520 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	TMPRSS3	P57727	454 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	INSM1	Q01101	510 aa	Predicted RBP	10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	DEUP1	Q05D60	604 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	CNTN1	Q12860	1018 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	ALF	Q53S48	1182 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	FAM102A	Q5T9C2	384 aa	Predicted RBP	10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	TFAP2D	Q7Z6R9	452 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	NOP9	Q86U38	636 aa	Known RBP	10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	ATP11C	Q8NB49	1132 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	ZNF397	Q8NF99	534 aa	Predicted RBP	10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	CPA5	Q8WXQ8	436 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	OR8D1	Q8WZ84	308 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	SKA1	Q96BD8	255 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	C18orf8	Q96DM3	657 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	WBP1	Q96G27	269 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	PPP1R9B	Q96SB3	815 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	NUP62CL	Q9H1M0	184 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	ARHGEF38	Q9NXL2	777 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	TAB2	Q9NYJ8	693 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	MPP6	Q9NZW5	540 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	STAP1	Q9ULZ2	295 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	CA5B	Q9Y2D0	317 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	PCDHB1	Q9Y5F3	818 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	OR51B4	Q9Y5P0	310 aa		10.84	□□□□□ -0.67
HMGN1-215	ENST00000485550	COL12A1	Q99715	3063 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550		A0A0D9SEW6	157 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	TLR4	O00206	839 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	ENDOD1	O94919	500 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	MPO	P05164	745 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	RHOC	P08134	193 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	MME	P08473	750 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	SRC	P12931	536 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	UCHL3	P15374	230 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	CKMT2	P17540	419 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	RRM1	P23921	792 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	ERCC5	P28715	1186 aa	Predicted RBP	10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	FLT3	P36888	993 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	GABRB2	P47870	512 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	CXCR3	P49682	368 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	PCBP4	P57723	403 aa	Known RBP	10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	FAM46C	Q5VWP2	391 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	LINGO4	Q6UY18	593 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	DSG4	Q86SJ6	1040 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	PRPF39	Q86UA1	669 aa	Known RBP	10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	XYLT1	Q86Y38	959 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	ZDHHC17	Q8IUH5	632 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	SH2D3C	Q8N5H7	860 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	TTC9	Q92623	222 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	KLK6	Q92876	244 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	PSMB7	Q99436	277 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	TRIM4	Q9C037	500 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	VPS16	Q9H269	839 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	GDF3	Q9NR23	364 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	RRN3	Q9NYV6	651 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	ARHGAP20	Q9P2F6	1191 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	DACH1	Q9UI36	760 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	PPM1H	Q9ULR3	514 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	TBC1D30	Q9Y2I9	924 aa		10.83	□□□□□ -0.68
HMGN1-215	ENST00000485550	DRGX	A6NNA5	263 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	C10orf142	B7Z368	130 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	C1QTNF3-AMACR	E9PGA6	284 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	RNF103	O00237	685 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	KPNA3	O00505	521 aa	Predicted RBP	10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	MCF2L	O15068	1137 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	SMAD6	O43541	496 aa	Known RBP	10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	MT-CO3	P00414	261 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	F9	P00740	461 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	CTSL	P07711	333 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	CDH5	P33151	784 aa	Predicted RBP	10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	ARRB1	P49407	418 aa	Predicted RBP	10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	KLK7	P49862	253 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	NXPH1	P58417	271 aa		10.82	□□□□□ -0.68
HMGN1-215	ENST00000485550	KRT83	P78385	493 aa		10.82	□□□□□ -0.68

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