RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 ANKRD11Q6UB99 2663 aaPredicted RBP12.49□□□□□ -0.41
TRA2B-213ENST00000485530 ATG2BQ96BY7 2078 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 A0A1W2PQF6 199 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 MIF4GDA9UHW6 222 aaKnown RBP12.49□□□□□ -0.41
TRA2B-213ENST00000485530 CBX4O00257 560 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 ENC1O14682 589 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 MFSD11O43934 449 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 CST8O60676 142 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 PEX11BO96011 259 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 ATP5BP06576 529 aaKnown RBP12.49□□□□□ -0.41
TRA2B-213ENST00000485530 LRRC32Q14392 662 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 EIF4HQ15056 248 aaKnown RBP12.49□□□□□ -0.41
TRA2B-213ENST00000485530 RPS6KA1Q15418 735 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 PARP15Q460N3 678 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 TFDP3Q5H9I0 405 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 KAZNQ674X7 775 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 IL31Q6EBC2 164 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 KIAA1211LQ6NV74 962 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 TMCO3Q6UWJ1 677 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 MAMSTRQ6ZN01 415 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 DCAF4L2Q8NA75 395 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 FRS2Q8WU20 508 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 EXOC4Q96A65 974 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 WDR24Q96S15 920 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 GABRG3Q99928 467 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 IER2Q9BTL4 223 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 PDFQ9HBH1 243 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 ATP13A1Q9HD20 1204 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 DTLQ9NZJ0 730 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRA2B-213ENST00000485530 RAD54BQ9Y620 910 aa12.49□□□□□ -0.41
TRA2B-213ENST00000485530 RNF103O00237 685 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 DFFAO00273 331 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 MAFKO60675 156 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 ATP1A1P05023 1023 aaKnown RBP12.48□□□□□ -0.41
TRA2B-213ENST00000485530 SRCP12931 536 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 PECAM1P16284 738 aaPredicted RBP12.48□□□□□ -0.41
TRA2B-213ENST00000485530 NTSR1P30989 418 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 CXCR5P32302 372 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 VASPP50552 380 aaPredicted RBP12.48□□□□□ -0.41
TRA2B-213ENST00000485530 CCR3P51677 355 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 COPS2P61201 443 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 DYNLT1P63172 113 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 SATB1Q01826 763 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 SIM2Q14190 667 aaPredicted RBP12.48□□□□□ -0.41
TRA2B-213ENST00000485530 CYTH1Q15438 398 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 HS1BP3Q53T59 392 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 NUDT18Q6ZVK8 323 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 RFX6Q8HWS3 928 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 CHPFQ8IZ52 775 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 SPEM1Q8N4L4 309 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 LZTR1Q8N653 840 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 UBL4BQ8N7F7 174 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 ACDQ96AP0 544 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 ZNF419Q96HQ0 510 aaPredicted RBP12.48□□□□□ -0.41
TRA2B-213ENST00000485530 OSBPL8Q9BZF1 889 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 MMP17Q9ULZ9 603 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 PLA2G4CQ9UP65 541 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 HS3ST2Q9Y278 367 aa12.48□□□□□ -0.41
TRA2B-213ENST00000485530 NUP205Q92621 2012 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 FASNP49327 2511 aaKnown RBP12.47□□□□□ -0.41
TRA2B-213ENST00000485530 WDFY3Q8IZQ1 3526 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 K7ESF4 209 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 APOL1O14791 398 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 HRO43593 1189 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 ATP9BO43861 1147 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 FOXD2O60548 495 aaPredicted RBP12.47□□□□□ -0.41
TRA2B-213ENST00000485530 PRAMEF11O60813 436 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 ASLP04424 464 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 PROS1P07225 676 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 SRPRAP08240 638 aaKnown RBP12.47□□□□□ -0.41
TRA2B-213ENST00000485530 PTPN7P35236 360 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 SULT2A1Q06520 285 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 GALNT2Q10471 571 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 SRSF5Q13243 272 aaKnown RBP12.47□□□□□ -0.41
TRA2B-213ENST00000485530 DLG2Q15700 870 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 CRY1Q16526 586 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 PPP2R5EQ16537 467 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 C9orf64Q5T6V5 341 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 BBS12Q6ZW61 710 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 SYT13Q7L8C5 426 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 CCDC50Q8IVM0 306 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 SH2D3CQ8N5H7 860 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 UCMAQ8WVF2 138 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 PTPRN2Q92932 1015 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 RBM41Q96IZ5 413 aaKnown RBP12.47□□□□□ -0.41
TRA2B-213ENST00000485530 NSMCE3Q96MG7 304 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 ALS2CR12Q96Q35 445 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 C2orf49Q9BVC5 232 aaPredicted RBP12.47□□□□□ -0.41
TRA2B-213ENST00000485530 MAK16Q9BXY0 300 aaKnown RBP12.47□□□□□ -0.41
TRA2B-213ENST00000485530 PRSS16Q9NQE7 514 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 IPO11Q9UI26 975 aaKnown RBP12.47□□□□□ -0.41
TRA2B-213ENST00000485530 EFR3BQ9Y2G0 817 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 JRKLQ9Y4A0 524 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 HEY1Q9Y5J3 304 aa12.47□□□□□ -0.41
TRA2B-213ENST00000485530 IGF2RP11717 2491 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 ARHGAP42A6NI28 874 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 KCNK3O14649 394 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 TM4SF5O14894 197 aa12.46□□□□□ -0.41
TRA2B-213ENST00000485530 MUSKO15146 869 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms