RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 CHPF2Q9P2E5 772 aa4.62□□□□□ -1.67
SCAF11-207ENST00000484275 SEL1LQ9UBV2 794 aa4.62□□□□□ -1.67
SCAF11-207ENST00000484275 OSGIN2Q9Y236 505 aa4.62□□□□□ -1.67
SCAF11-207ENST00000484275 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-207ENST00000484275 BUB3O43684 328 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 ENO3P13929 434 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-207ENST00000484275 GSTM2P28161 218 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 PCP4P48539 62 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 CDK7P50613 346 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 POU3F1Q03052 451 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-207ENST00000484275 ALKBH1Q13686 389 aaKnown RBP4.61□□□□□ -1.67
SCAF11-207ENST00000484275 GXYLT1Q4G148 440 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 IL31Q6EBC2 164 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 RETSATQ6NUM9 610 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 KSR2Q6VAB6 950 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 SERPINA11Q86U17 422 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 PALB2Q86YC2 1186 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 ZDHHC23Q8IYP9 409 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 DEPTORQ8TB45 409 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 GPT2Q8TD30 523 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 ARRDC3Q96B67 414 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.61□□□□□ -1.67
SCAF11-207ENST00000484275 ABHD16BQ9H3Z7 469 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 DONSONQ9NYP3 566 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 CDC23Q9UJX2 597 aa4.61□□□□□ -1.67
SCAF11-207ENST00000484275 C17orf102A2RUQ5 167 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 C17orf100A8MU93 164 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 RNMTO43148 476 aaKnown RBP4.6□□□□□ -1.67
SCAF11-207ENST00000484275 ITM2AO43736 263 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 F7P08709 466 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-207ENST00000484275 AVPR2P30518 371 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 CLCNKBP51801 687 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 PNLIPRP1P54315 467 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 CTTNQ14247 550 aaKnown RBP4.6□□□□□ -1.67
SCAF11-207ENST00000484275 SF3B4Q15427 424 aaKnown RBP eCLIP4.6□□□□□ -1.67
SCAF11-207ENST00000484275 TBRG1Q3YBR2 411 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 TBC1D9BQ66K14 1250 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 FBXL22Q6P050 247 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 NFRKBQ6P4R8 1299 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 WDR5BQ86VZ2 330 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 TMEM255BQ8WV15 326 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 RTKNQ9BST9 563 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 LHPPQ9H008 270 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 ACAD9Q9H845 621 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 OBP2BQ9NPH6 170 aa4.6□□□□□ -1.67
SCAF11-207ENST00000484275 LGALS16A8MUM7 142 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 BMPR1BO00238 502 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 C21orf33P30042 268 aaPredicted RBP4.59□□□□□ -1.67
SCAF11-207ENST00000484275 MXI1P50539 228 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 NEK3P51956 506 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 DCTN1Q14203 1278 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 PTK2BQ14289 1009 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 MRGPRG-AS1Q2M3A8 158 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 LRRC24Q50LG9 513 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 LCE1FQ5T754 118 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 TTC22Q5TAA0 569 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 SCAMP5Q8TAC9 235 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 SPATA20Q8TB22 786 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 TMEM18Q96B42 140 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 TMEM41AQ96HV5 264 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 ADGRG7Q96K78 797 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 MYD88Q99836 296 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 KATNAL1Q9BW62 490 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 TCF7L2Q9NQB0 619 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 UPB1Q9UBR1 384 aa4.59□□□□□ -1.67
SCAF11-207ENST00000484275 SHROOM4Q9ULL8 1493 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 TARSL2A2RTX5 802 aaKnown RBP4.58□□□□□ -1.68
SCAF11-207ENST00000484275 GOLGA6L3A6NEY3 463 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 EFCAB8A8MWE9 144 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 EYA2O00167 538 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 SERPINI2O75830 405 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 AFPP02771 609 aaKnown RBP4.58□□□□□ -1.68
SCAF11-207ENST00000484275 SP1P08047 785 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 RFC1P35251 1148 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-207ENST00000484275 PPM1AP35813 382 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 GNALP38405 381 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 STARD3Q14849 445 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 ATPAF1Q5TC12 328 aaPredicted RBP4.58□□□□□ -1.68
SCAF11-207ENST00000484275 GGT6Q6P531 493 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 SRLQ86TD4 932 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 RBFAQ8N0V3 343 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 ZNF114Q8NC26 417 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 MSTO1Q9BUK6 570 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 IFT27Q9BW83 186 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 CADM1Q9BY67 442 aaKnown RBP4.58□□□□□ -1.68
SCAF11-207ENST00000484275 CLPBQ9H078 707 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 BRD8Q9H0E9 1235 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 PRDM8Q9NQV8 689 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 KLQ9UEF7 1012 aa4.58□□□□□ -1.68
SCAF11-207ENST00000484275 DYTNA2CJ06 578 aa4.57□□□□□ -1.68
SCAF11-207ENST00000484275 TMEM247A6NEH6 219 aa4.57□□□□□ -1.68
SCAF11-207ENST00000484275 PRR23AA6NEV1 266 aa4.57□□□□□ -1.68
SCAF11-207ENST00000484275 NBPF7P0C2Y1 421 aaPredicted RBP4.57□□□□□ -1.68
SCAF11-207ENST00000484275 DAOP14920 347 aa4.57□□□□□ -1.68
SCAF11-207ENST00000484275 DPP6P42658 865 aa4.57□□□□□ -1.68
SCAF11-207ENST00000484275 TECP42680 631 aa4.57□□□□□ -1.68
SCAF11-207ENST00000484275 LIN54Q6MZP7 749 aa4.57□□□□□ -1.68
SCAF11-207ENST00000484275 SMIM29Q86T20 159 aa4.57□□□□□ -1.68
SCAF11-207ENST00000484275 SCAIQ8N9R8 606 aa4.57□□□□□ -1.68
SCAF11-207ENST00000484275 EID2BQ96D98 161 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms