RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 KRT71Q3SY84 523 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ANKRD20A8PQ5CZ79 823 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 BSPRYQ5W0U4 402 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 BTBD8Q5XKL5 378 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 C4orf22Q6V702 233 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ANKS1BQ7Z6G8 1248 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 DENND1CQ8IV53 801 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 PHTF2Q8N3S3 785 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 SLC2A13Q96QE2 648 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 TMEM121Q9BTD3 319 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 OSBPL6Q9BZF3 934 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 TPSD1Q9BZJ3 242 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 KCNH6Q9H252 994 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 CENPHQ9H3R5 247 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 PCDH18Q9HCL0 1135 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 SPHK2Q9NRA0 654 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 MARCH2Q9P0N8 246 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 COX16Q9P0S2 106 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 XPO7Q9UIA9 1087 aaKnown RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ZMYM5Q9UJ78 669 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 DNMT3LQ9UJW3 386 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 ADAM21Q9UKJ8 722 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 AGO1Q9UL18 857 aaKnown RBP7.11□□□□□ -1.27
BRCA1-216ENST00000484087 HCN2Q9UL51 889 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 NAALADL1Q9UQQ1 740 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 INVSQ9Y283 1065 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 NEU2Q9Y3R4 380 aa7.11□□□□□ -1.27
BRCA1-216ENST00000484087 PIEZO1Q92508 2521 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 E2F8A0AVK6 867 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 SOBPA7XYQ1 873 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 DCLK1O15075 740 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 NCAM2O15394 837 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 TULP3O75386 442 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 MOCS2O96007 188 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-216ENST00000484087 IVLP07476 585 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 TYRP14679 529 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 ATP5DP30049 168 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 CXCL12P48061 93 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 NME3Q13232 169 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 XRCC4Q13426 336 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 LRRC32Q14392 662 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 CCDC6Q16204 474 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 UAP1Q16222 522 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-216ENST00000484087 ZC3H12AQ5D1E8 599 aaKnown RBP7.1□□□□□ -1.27
BRCA1-216ENST00000484087 C6orf118Q5T5N4 469 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 AGBL2Q5U5Z8 902 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 SYPL2Q5VXT5 272 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 SLC9A4Q6AI14 798 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 PM20D1Q6GTS8 502 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 RFWD3Q6PCD5 774 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 C1orf228Q6PIY5 440 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 PPP1R21Q6ZMI0 780 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 CENPUQ71F23 418 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 TAC4Q86UU9 113 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 FAM131BQ86XD5 332 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 CACUL1Q86Y37 369 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 CDKL3Q8IVW4 592 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-216ENST00000484087 ETFBKMTQ8IXQ9 262 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 PPIL6Q8IXY8 311 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 SCML4Q8N228 414 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 ZCCHC9Q8N567 271 aaKnown RBP7.1□□□□□ -1.27
BRCA1-216ENST00000484087 FRMD1Q8N878 549 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 WFDC5Q8TCV5 224 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 FAF2Q96CS3 445 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 ATP6V1G3Q96LB4 118 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 TTC25Q96NG3 672 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 ACOX2Q99424 681 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 NELL2Q99435 816 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 NPY6RQ99463 290 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 PRRX2Q99811 253 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 BBS2Q9BXC9 721 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 TXLNGYQ9BZA5 131 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 SLC6A17Q9H1V8 727 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 TMBIM4Q9HC24 238 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 CD93Q9NPY3 652 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 ARHGEF4Q9NR80 690 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 DNAJC17Q9NVM6 304 aaKnown RBP7.1□□□□□ -1.27
BRCA1-216ENST00000484087 GPATCH2LQ9NWQ4 482 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 COMMD8Q9NX08 183 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 PSD3Q9NYI0 1048 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 CALCOCO1Q9P1Z2 691 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 PAK5Q9P286 719 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 BCCIPQ9P287 314 aaKnown RBP eCLIP7.1□□□□□ -1.27
BRCA1-216ENST00000484087 FZD10Q9ULW2 581 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 SHOC2Q9UQ13 582 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 HEY1Q9Y5J3 304 aa7.1□□□□□ -1.27
BRCA1-216ENST00000484087 SPAG17Q6Q759 2223 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 RALGAPA1Q6GYQ0 2036 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 OTOGLQ3ZCN5 2332 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 GVINP1Q7Z2Y8 2422 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 HACD1B0YJ81 288 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 PRRT4C9JH25 899 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 RIPK2O43353 540 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 STK10O94804 968 aaKnown RBP7.09□□□□□ -1.27
BRCA1-216ENST00000484087 KAT7O95251 611 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 KLF8O95600 359 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-216ENST00000484087 ADH1CP00326 375 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 PFKLP17858 780 aa7.09□□□□□ -1.27
BRCA1-216ENST00000484087 TFE3P19532 575 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-216ENST00000484087 IVDP26440 423 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms