RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 NTRK1P04629 796 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 ITGB2P05107 769 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 HGFP14210 728 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 PFKFB1P16118 471 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 JUNDP17535 347 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 WT1P19544 449 aaPredicted RBP11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 GGCXP38435 758 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 RPL34P49207 117 aaKnown RBP11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 YWHAEP62258 255 aaKnown RBP11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 CYP4F2P78329 520 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 TLE1Q04724 770 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 EIF2B5Q13144 721 aaKnown RBP11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 EIF4EBP2Q13542 120 aaPredicted RBP11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 PDE1CQ14123 709 aaPredicted RBP11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 TBR1Q16650 682 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 RABGAP1LQ5R372 815 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 ERICH6BQ5W0A0 696 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 KYAT3Q6YP21 454 aaKnown RBP11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 ERN2Q76MJ5 926 aaKnown RBP11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 JAMLQ86YT9 394 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 DCP2Q8IU60 420 aaKnown RBP11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 SMYD4Q8IYR2 804 aaPredicted RBP11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 GRIN3AQ8TCU5 1115 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 IL12RB2Q99665 862 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 CCDC3Q9BQI4 270 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 BOCQ9BWV1 1114 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 SLC17A9Q9BYT1 436 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 EPB41L5Q9HCM4 733 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 ST7Q9NRC1 585 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 NCKIPSDQ9NZQ3 722 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 PNMA8BQ9ULN7 279 aaPredicted RBP11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 HS3ST2Q9Y278 367 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 PCDHB4Q9Y5E5 795 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 PCDHGA7Q9Y5G6 932 aa11.13□□□□□ -0.63
SMARCC1-205ENST00000483847 NBPF19A0A087WUL8 3843 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 SCN8AQ9UQD0 1980 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 TPP1O14773 563 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 PLD2O14939 933 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 EPB41P11171 864 aaKnown RBP11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 RRM1P23921 792 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 UGT1A5P35504 534 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 GPD2P43304 727 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 DPYDQ12882 1025 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 C1orf61Q13536 156 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 SPIDRQ14159 915 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 TAF5Q15542 800 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 EDRF1Q3B7T1 1238 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 ARSIQ5FYB1 569 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 TTC39BQ5VTQ0 682 aaPredicted RBP11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 XKR5Q6UX68 686 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 BEND5Q7L4P6 421 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 C14orf80Q86SX3 495 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 VASH2Q86V25 355 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 ATP6V0D2Q8N8Y2 350 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 ATP11CQ8NB49 1132 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 TMIEQ8NEW7 156 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 LIN37Q96GY3 246 aaPredicted RBP11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 PPP1R13BQ96KQ4 1090 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 RPRD1AQ96P16 312 aaPredicted RBP11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 PSMB7Q99436 277 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 KLF6Q99612 283 aaPredicted RBP11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 SEMA3CQ99985 751 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 HDAC8Q9BY41 377 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 FOXP3Q9BZS1 431 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 TNKS2Q9H2K2 1166 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 IPO11Q9UI26 975 aaKnown RBP11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 RABGEF1Q9UJ41 708 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 VANGL2Q9ULK5 521 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 PCDHGA4Q9Y5G9 962 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 NOTCH2Q04721 2471 aa11.12□□□□□ -0.63
SMARCC1-205ENST00000483847 NBASA2RRP1 2371 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 SYNJ2BP-COX16A0A087WUM0 186 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 AGRPO00253 132 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 NTN3O00634 580 aaPredicted RBP11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 CETN3O15182 167 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 MYL1P05976 194 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 GP1BBP13224 206 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 TBXAS1P24557 533 aaPredicted RBP11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 RABIFP47224 123 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 ADKP55263 362 aaKnown RBP11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 OXCT1P55809 520 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 YWHAZP63104 245 aaKnown RBP11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 AUHQ13825 339 aaKnown RBP11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 UBAP2LQ14157 1087 aaKnown RBP11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 CLCA4Q14CN2 919 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 DENND1BQ6P3S1 775 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 LINGO4Q6UY18 593 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 RAB11FIP2Q7L804 512 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 FBXO39Q8N4B4 442 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 FAM174AQ8TBP5 190 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 HTR3CQ8WXA8 447 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 RNF34Q969K3 372 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 LRRC61Q9BV99 259 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 MUC3BQ9H195 1237 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 FAM204AQ9H8W3 233 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 POPDC2Q9HBU9 364 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 DYRK4Q9NR20 520 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 COX16Q9P0S2 106 aa11.11□□□□□ -0.63
SMARCC1-205ENST00000483847 VPS51Q9UID3 782 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms