RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 KRT3P12035 628 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 RHOQP17081 205 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 CDK11BP21127 795 aaKnown RBP20.28■□□□□ 0.84
HPS4-213ENST00000483631 GEMIN4P57678 1058 aaKnown RBP20.28■□□□□ 0.84
HPS4-213ENST00000483631 TAS2R38P59533 333 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 UBXN1Q04323 297 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 CLEC16AQ2KHT3 1053 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 CCDC183Q5T5S1 534 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 GALNT15Q8N3T1 639 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 PNPLA1Q8N8W4 532 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 C3orf20Q8ND61 904 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 OR7D4Q8NG98 312 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 SLC30A5Q8TAD4 765 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 SAP25Q8TEE9 199 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 PCMTD1Q96MG8 357 aaPredicted RBP20.28■□□□□ 0.84
HPS4-213ENST00000483631 ATP13A1Q9HD20 1204 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 PCDHGA1Q9Y5H4 931 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 ACACAQ13085 2346 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 ASPMQ8IZT6 3477 aa20.28■□□□□ 0.84
HPS4-213ENST00000483631 ANKRD11Q6UB99 2663 aaPredicted RBP20.27■□□□□ 0.84
HPS4-213ENST00000483631 PKD1L2Q7Z442 2459 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 SIGLEC16A6NMB1 481 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 K7ERQ8 282 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 CBX4O00257 560 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 PLK4O00444 970 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 KPNA3O00505 521 aaPredicted RBP20.27■□□□□ 0.84
HPS4-213ENST00000483631 WNT9AO14904 365 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 BNIP3LO60238 219 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 CAPNS1P04632 268 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 EPHA8P29322 1005 aaPredicted RBP20.27■□□□□ 0.84
HPS4-213ENST00000483631 C1QBPQ07021 282 aaKnown RBP20.27■□□□□ 0.84
HPS4-213ENST00000483631 SCAPQ12770 1279 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 STAT4Q14765 748 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 NCAPHQ15003 741 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 SHBQ15464 509 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 C15orf59Q2T9L4 293 aaPredicted RBP20.27■□□□□ 0.84
HPS4-213ENST00000483631 APTXQ7Z2E3 356 aaKnown RBP20.27■□□□□ 0.84
HPS4-213ENST00000483631 ZSCAN30Q86W11 494 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 NLRP14Q86W24 1093 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 JOSD2Q8TAC2 188 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 ISG20Q96AZ6 181 aaKnown RBP20.27■□□□□ 0.84
HPS4-213ENST00000483631 PCDHB18PQ96TA0 734 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 SPON2Q9BUD6 331 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 TMEM248Q9NWD8 314 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 FTSJ1Q9UET6 329 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 IL36AQ9UHA7 158 aa20.27■□□□□ 0.84
HPS4-213ENST00000483631 ZNF821O75541 412 aaPredicted RBP20.26■□□□□ 0.83
HPS4-213ENST00000483631 ITGAVP06756 1048 aa20.26■□□□□ 0.83
HPS4-213ENST00000483631 HDAC4P56524 1084 aa20.26■□□□□ 0.83
HPS4-213ENST00000483631 CDO1Q16878 200 aa20.26■□□□□ 0.83
HPS4-213ENST00000483631 PPP1R2P3Q6NXS1 205 aa20.26■□□□□ 0.83
HPS4-213ENST00000483631 LINGO4Q6UY18 593 aa20.26■□□□□ 0.83
HPS4-213ENST00000483631 DPY19L3Q6ZPD9 716 aa20.26■□□□□ 0.83
HPS4-213ENST00000483631 ERN2Q76MJ5 926 aaKnown RBP20.26■□□□□ 0.83
HPS4-213ENST00000483631 HORMAD1Q86X24 394 aa20.26■□□□□ 0.83
HPS4-213ENST00000483631 TMEM145Q8NBT3 493 aa20.26■□□□□ 0.83
HPS4-213ENST00000483631 FAM174AQ8TBP5 190 aa20.26■□□□□ 0.83
HPS4-213ENST00000483631 FAM172AQ8WUF8 416 aa20.26■□□□□ 0.83
HPS4-213ENST00000483631 SELENOOQ9BVL4 669 aa20.26■□□□□ 0.83
HPS4-213ENST00000483631 NAT10Q9H0A0 1025 aaKnown RBP20.26■□□□□ 0.83
HPS4-213ENST00000483631 MAGEH1Q9H213 219 aa20.26■□□□□ 0.83
HPS4-213ENST00000483631 HSD3B7Q9H2F3 369 aa20.26■□□□□ 0.83
HPS4-213ENST00000483631 MYO6Q9UM54 1294 aa20.26■□□□□ 0.83
HPS4-213ENST00000483631 C1SP09871 688 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 GPD1P21695 349 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 GLDCP23378 1020 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 MAT2AP31153 395 aaKnown RBP20.25■□□□□ 0.83
HPS4-213ENST00000483631 RFC1P35251 1148 aaPredicted RBP20.25■□□□□ 0.83
HPS4-213ENST00000483631 AIF1P55008 147 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 ARF5P84085 180 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 IL9RQ01113 521 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 POM121L1PQ3SYA9 428 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 CARD16Q5EG05 197 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 MON1BQ7L1V2 547 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 DRC7Q8IY82 874 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 CHST14Q8NCH0 376 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 ARRDC3Q96B67 414 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 TBC1D31Q96DN5 1066 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 LRIG1Q96JA1 1093 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 AGPAT1Q99943 283 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 HEPHQ9BQS7 1158 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 NEU3Q9UQ49 428 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 WASF2Q9Y6W5 498 aa20.25■□□□□ 0.83
HPS4-213ENST00000483631 TCRBV5S1A1TA0A578 114 aa20.24■□□□□ 0.83
HPS4-213ENST00000483631 FAM170AA1A519 330 aa20.24■□□□□ 0.83
HPS4-213ENST00000483631 ANKRD62A6NC57 917 aa20.24■□□□□ 0.83
HPS4-213ENST00000483631 SRRM3A6NNA2 597 aaPredicted RBP20.24■□□□□ 0.83
HPS4-213ENST00000483631 LEFTY1O75610 366 aa20.24■□□□□ 0.83
HPS4-213ENST00000483631 LRIG2O94898 1065 aa20.24■□□□□ 0.83
HPS4-213ENST00000483631 PLEKP08567 350 aaPredicted RBP20.24■□□□□ 0.83
HPS4-213ENST00000483631 FERP16591 822 aa20.24■□□□□ 0.83
HPS4-213ENST00000483631 ITGB7P26010 798 aa20.24■□□□□ 0.83
HPS4-213ENST00000483631 NEK3P51956 506 aa20.24■□□□□ 0.83
HPS4-213ENST00000483631 SMAD1Q15797 465 aaKnown RBP20.24■□□□□ 0.83
HPS4-213ENST00000483631 ARSIQ5FYB1 569 aa20.24■□□□□ 0.83
HPS4-213ENST00000483631 SFMBT2Q5VUG0 894 aa20.24■□□□□ 0.83
HPS4-213ENST00000483631 WDR59Q6PJI9 974 aa20.24■□□□□ 0.83
HPS4-213ENST00000483631 SPATS2Q86XZ4 545 aaKnown RBP20.24■□□□□ 0.83
HPS4-213ENST00000483631 BPIFA3Q9BQP9 254 aa20.24■□□□□ 0.83
HPS4-213ENST00000483631 TNKS2Q9H2K2 1166 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms