RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 TRIM60Q495X7 471 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 ZNF672Q499Z4 452 aaPredicted RBP3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 C5orf22Q49AR2 442 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 WDR78Q5VTH9 848 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 GATAD2AQ86YP4 633 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 NPAS1Q99742 590 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 LIN7CQ9NUP9 197 aaKnown RBP3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 PNMA2Q9UL42 364 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 PHTF1Q9UMS5 762 aa3.33□□□□□ -1.88
LAPTM4A-202ENST00000483117 LINC01553A4QN01 128 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 HSPB6O14558 160 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 SLC16A5O15375 505 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 KCNJ13O60928 360 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 SOX30O94993 753 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 FCGR2AP12318 317 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 NAGAP17050 411 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 CD53P19397 219 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 GSTM2P28161 218 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 OAZ1P54368 228 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 AK2P54819 239 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 CDH12P55289 794 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 DLX5P56178 289 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 TRAF2Q12933 501 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 SLC39A14Q15043 492 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 MAPRE1Q15691 268 aaKnown RBP3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 KIF19Q2TAC6 998 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 SYTL3Q4VX76 610 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 OTUD3Q5T2D3 398 aaPredicted RBP3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 ATG9BQ674R7 924 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 KRBA2Q6ZNG9 492 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 PALB2Q86YC2 1186 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 SYTL1Q8IYJ3 562 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 PAF1Q8N7H5 531 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 C2CD4CQ8TF44 421 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 FAM216AQ8WUB2 273 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 SLC35F5Q8WV83 523 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 KCNJ9Q92806 393 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 SLC39A13Q96H72 371 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 ZNF333Q96JL9 665 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 TNIP3Q96KP6 325 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 INPP4AQ96PE3 977 aaPredicted RBP3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 GFM1Q96RP9 751 aaKnown RBP3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 IL25Q9H293 177 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 DDX31Q9H8H2 851 aaKnown RBP3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 IL36RNQ9UBH0 155 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 ZNF69Q9UC07 566 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 FBXO9Q9UK97 447 aaPredicted RBP3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 RCE1Q9Y256 329 aa3.32□□□□□ -1.88
LAPTM4A-202ENST00000483117 NPIPB13A6NJU9 1138 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 NPIPB5A8MRT5 1133 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 NPIPB4C9JG80 1138 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 CLDN7O95471 211 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 HLA-DQA2P01906 255 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 LYL1P12980 280 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 TCEA1P23193 301 aaKnown RBP3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 PRKCHP24723 683 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 PCP4P48539 62 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 TUBA1BP68363 451 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 IRX6P78412 446 aaPredicted RBP3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 TMEM95Q3KNT9 176 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 ZACNQ401N2 412 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 RETSATQ6NUM9 610 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 MON1BQ7L1V2 547 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 TRIM74Q86UV6 250 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 TRIM73Q86UV7 250 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 FOXP4Q8IVH2 680 aaPredicted RBP3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 TMTC2Q8N394 836 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 TCP11L2Q8N4U5 519 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 FAR1Q8WVX9 515 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 SGCZQ96LD1 299 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 ELAC2Q9BQ52 826 aaKnown RBP3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 TRIM31Q9BZY9 425 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 CDC23Q9UJX2 597 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 SRPRBQ9Y5M8 271 aaKnown RBP3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 SCINQ9Y6U3 715 aa3.31□□□□□ -1.88
LAPTM4A-202ENST00000483117 MST1RQ04912 1400 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 IGLV5-52A0A0A0MRZ9 124 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 A0A0B4J293 547 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 IGHV4-28A0A0C4DH34 117 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 DDTLA6NHG4 134 aaPredicted RBP3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 SOCS5O75159 536 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 SNRNP70P08621 437 aaKnown RBP3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 MYZAPP0CAP1 466 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 RFC1P35251 1148 aaPredicted RBP3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 ALKBH1Q13686 389 aaKnown RBP3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 MYBPC2Q14324 1141 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 SPARCL1Q14515 664 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 STARD3Q14849 445 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 GRAMD1BQ3KR37 738 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 GXYLT1Q4G148 440 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 WBP2NLQ6ICG8 309 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 MUC20Q8N307 709 aaPredicted RBP3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 LILRB1Q8NHL6 650 aaPredicted RBP3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 DEPTORQ8TB45 409 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 FAM71BQ8TC56 605 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 RSC1A1Q92681 617 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 ARRDC3Q96B67 414 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 IGSF21Q96ID5 467 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 DUX5Q96PT3 197 aa3.3□□□□□ -1.88
LAPTM4A-202ENST00000483117 PKP4Q99569 1192 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms