RNA–Protein interactions for RNA: ENST00000482582.5

TRAIP-208, Transcript of TRAF interacting protein, human

TSL 5

Gene TRAIP, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAIP-208	ENST00000482582	SMARCAL1	Q9NZC9	954 aa		12.02	□□□□□ -0.49
TRAIP-208	ENST00000482582	SNX12	Q9UMY4	172 aa		12.02	□□□□□ -0.49
TRAIP-208	ENST00000482582	PLA2G4C	Q9UP65	541 aa		12.02	□□□□□ -0.49
TRAIP-208	ENST00000482582	HS3ST2	Q9Y278	367 aa		12.02	□□□□□ -0.49
TRAIP-208	ENST00000482582	STON1	Q9Y6Q2	735 aa		12.02	□□□□□ -0.49
TRAIP-208	ENST00000482582	ANKRD36	A6QL64	1941 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	CHURC1-FNTB	B4DL54	471 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	APOC4-APOC2	K7ER74	178 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	ZNF185	O15231	689 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	NCAM2	O15394	837 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	ATP9B	O43861	1147 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	ZNF821	O75541	412 aa	Predicted RBP	12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	APOC2	P02655	101 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	SRPRA	P08240	638 aa	Known RBP	12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	TGM2	P21980	687 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	MSN	P26038	577 aa	Known RBP	12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	NTSR1	P30989	418 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	CETN2	P41208	172 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	VASP	P50552	380 aa	Predicted RBP	12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	OTUD4	Q01804	1114 aa	Known RBP	12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	IL10RB	Q08334	325 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	MTAP	Q13126	283 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	CYTH1	Q15438	398 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	SIX1	Q15475	284 aa	Predicted RBP	12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	DLG2	Q15700	870 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	SEL1L2	Q5TEA6	688 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	PAPD7	Q5XG87	772 aa	Known RBP	12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	KIAA1211L	Q6NV74	962 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	TMEM92	Q6UXU6	159 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	SYT10	Q6XYQ8	523 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	C1orf210	Q8IVY1	113 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	CHPF	Q8IZ52	775 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	ATPAF2	Q8N5M1	289 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	ACTL9	Q8TC94	416 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	KCNV2	Q8TDN2	545 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	ZNF419	Q96HQ0	510 aa	Predicted RBP	12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	C16orf45	Q96MC5	204 aa	Predicted RBP	12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	TSGA13	Q96PP4	275 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	NAPG	Q99747	312 aa	Predicted RBP	12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	C10orf88	Q9H8K7	445 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	CD248	Q9HCU0	757 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	SLC25A13	Q9UJS0	675 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	MMP17	Q9ULZ9	603 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	HPCAL4	Q9UM19	191 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	FCF1	Q9Y324	198 aa	Known RBP	12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	RAD54B	Q9Y620	910 aa		12.01	□□□□□ -0.49
TRAIP-208	ENST00000482582	FANCM	Q8IYD8	2048 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582		A0A1W2PQF6	199 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	CTAGE9	A4FU28	777 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	TMCC1	O94876	653 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	TJP3	O95049	919 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	FGG	P02679	453 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	NR2C2	P49116	596 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	SERPINH1	P50454	418 aa	Known RBP	12	□□□□□ -0.49
TRAIP-208	ENST00000482582	SLC20A2	Q08357	652 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	SLC10A7	Q0GE19	358 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	NUMA1	Q14980	2115 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	NOMO1	Q15155	1222 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	RETSAT	Q6NUM9	610 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	SERPINA13P	Q6UXR4	307 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	ZC3H18	Q86VM9	953 aa	Known RBP	12	□□□□□ -0.49
TRAIP-208	ENST00000482582	ZSCAN30	Q86W11	494 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	RASGEF1C	Q8N431	466 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	ATP11C	Q8NB49	1132 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	KDM1B	Q8NB78	822 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	CCNY	Q8ND76	341 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	P3H4	Q92791	437 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	PTPRN2	Q92932	1015 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	HDAC11	Q96DB2	347 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	PBK	Q96KB5	322 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	GABRG3	Q99928	467 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	TNKS2	Q9H2K2	1166 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	SP110	Q9HB58	689 aa		12	□□□□□ -0.49
TRAIP-208	ENST00000482582	UBA2	Q9UBT2	640 aa	Predicted RBP	12	□□□□□ -0.49
TRAIP-208	ENST00000482582	EML5	Q05BV3	1969 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	ZFHX4	Q86UP3	3567 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	EPG5	Q9HCE0	2579 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	NPC1	O15118	1278 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	MUSK	O15146	869 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	SIN3B	O75182	1162 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	EPHX1	P07099	455 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	MX2	P20592	715 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	CCNC	P24863	283 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	RGR	P47804	291 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	ST8SIA6	P61647	398 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	SATB1	Q01826	763 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	PPID	Q08752	370 aa	Known RBP	11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	PDK1	Q15118	436 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	PRKD1	Q15139	912 aa	Predicted RBP	11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	HNRNPA1L2	Q32P51	320 aa	Known RBP	11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	ACCSL	Q4AC99	568 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	C9orf64	Q5T6V5	341 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	CCDC181	Q5TID7	509 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	C22orf39	Q6P5X5	142 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582		Q6ZVU0	165 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	DGLUCY	Q7Z3D6	616 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	LRRC49	Q8IUZ0	686 aa		11.99	□□□□□ -0.49
TRAIP-208	ENST00000482582	SPEM1	Q8N4L4	309 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms