RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ARF4P18085 180 aaPredicted RBP7.96□□□□□ -1.14
SNX13-208ENST00000482558 CYP3A5P20815 502 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 PHBP35232 272 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 CDKN2BP42772 138 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 KCNJ1P48048 391 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 RPL7AP62424 266 aaKnown RBP7.96□□□□□ -1.14
SNX13-208ENST00000482558 ROR1Q01973 937 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 GUCY1A3Q02108 690 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 SNX1Q13596 522 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 LRRC32Q14392 662 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 ACAP2Q15057 778 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 CCDC38Q502W7 563 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 ERMARDQ5T6L9 678 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 IZUMO3Q5VZ72 239 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 CENPUQ71F23 418 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 PDZD4Q76G19 769 aaPredicted RBP7.96□□□□□ -1.14
SNX13-208ENST00000482558 OVCH2Q7RTZ1 564 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 SNX32Q86XE0 403 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 XYLT1Q86Y38 959 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 WDTC1Q8N5D0 677 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 CMASQ8NFW8 434 aaPredicted RBP7.96□□□□□ -1.14
SNX13-208ENST00000482558 OR6J1Q8NGC5 347 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 ZNF473Q8WTR7 871 aaKnown RBP7.96□□□□□ -1.14
SNX13-208ENST00000482558 TEKT4Q8WW24 435 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 KCTD13Q8WZ19 329 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 TFAP2BQ92481 460 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 COPS5Q92905 334 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 TBC1D20Q96BZ9 403 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 HAUS1Q96CS2 278 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 CHMP6Q96FZ7 201 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 MAML3Q96JK9 1138 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 HEXIM2Q96MH2 286 aaKnown RBP7.96□□□□□ -1.14
SNX13-208ENST00000482558 ZNF560Q96MR9 790 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 XPO6Q96QU8 1125 aaKnown RBP7.96□□□□□ -1.14
SNX13-208ENST00000482558 HEMGNQ9BXL5 484 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 ASPNQ9BXN1 380 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 MAK16Q9BXY0 300 aaKnown RBP7.96□□□□□ -1.14
SNX13-208ENST00000482558 KLHL25Q9H0H3 589 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 CDC42EP4Q9H3Q1 356 aaKnown RBP7.96□□□□□ -1.14
SNX13-208ENST00000482558 MINDY3Q9H8M7 445 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 ACTR5Q9H9F9 607 aaPredicted RBP7.96□□□□□ -1.14
SNX13-208ENST00000482558 PRDM5Q9NQX1 630 aaPredicted RBP7.96□□□□□ -1.14
SNX13-208ENST00000482558 INTS9Q9NV88 658 aaKnown RBP7.96□□□□□ -1.14
SNX13-208ENST00000482558 GPRC5BQ9NZH0 403 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 LMCD1Q9NZU5 365 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 HESX1Q9UBX0 185 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 UBQLN1Q9UMX0 589 aaKnown RBP7.96□□□□□ -1.14
SNX13-208ENST00000482558 AGAP1Q9UPQ3 857 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 POLHQ9Y253 713 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 TMEM98Q9Y2Y6 226 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 PLXNA1Q9UIW2 1896 aa7.96□□□□□ -1.14
SNX13-208ENST00000482558 PLXNB2O15031 1838 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 GOLGA6L7A0A1B0GV03 622 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 MBLAC1A4D2B0 266 aaPredicted RBP7.95□□□□□ -1.14
SNX13-208ENST00000482558 PABPN1LA6NDY0 278 aaKnown RBP7.95□□□□□ -1.14
SNX13-208ENST00000482558 F8VP50 259 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 APOC4-APOC2K7ER74 178 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 M0QYV0 167 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 O00370 1275 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 AREL1O15033 823 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 MCF2LO15068 1137 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 ALOX15BO15296 676 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 MEFVO15553 781 aaPredicted RBP7.95□□□□□ -1.14
SNX13-208ENST00000482558 TBX1O43435 398 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 SPAG6O75602 509 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 SNAI1O95863 264 aaPredicted RBP7.95□□□□□ -1.14
SNX13-208ENST00000482558 APOC2P02655 101 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 SOD2P04179 222 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 ZFXP17010 805 aaPredicted RBP7.95□□□□□ -1.14
SNX13-208ENST00000482558 GPD1P21695 349 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 KDELR1P24390 212 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 RFC1P35251 1148 aaPredicted RBP7.95□□□□□ -1.14
SNX13-208ENST00000482558 KRT20P35900 424 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 GPD2P43304 727 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 MAGEA4P43358 317 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 ACADSBP45954 432 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 CPT1AP50416 773 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 SLC8A3P57103 927 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 OSTNP61366 133 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 SLC25A11Q02978 314 aaKnown RBP7.95□□□□□ -1.14
SNX13-208ENST00000482558 WASHC5Q12768 1159 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 AUHQ13825 339 aaKnown RBP7.95□□□□□ -1.14
SNX13-208ENST00000482558 OASLQ15646 514 aaKnown RBP7.95□□□□□ -1.14
SNX13-208ENST00000482558 PTPN20Q4JDL3 420 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 ARHGAP17Q68EM7 881 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 ITPRIPL1Q6GPH6 555 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 DENND1BQ6P3S1 775 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 MFSD7Q6UXD7 560 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 SCARA5Q6ZMJ2 495 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 ARHGEF18Q6ZSZ5 1173 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 MOB2Q70IA6 237 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 FAM214BQ7L5A3 538 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 CPLX4Q7Z7G2 160 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 SESTD1Q86VW0 696 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 CCDC25Q86WR0 208 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 PPIL6Q8IXY8 311 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 KIAA0319LQ8IZA0 1049 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 CACNA2D3Q8IZS8 1091 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 KRT78Q8N1N4 520 aa7.95□□□□□ -1.14
SNX13-208ENST00000482558 OTUD6BQ8N6M0 293 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms