RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 DNAI2Q9GZS0 605 aa10.81□□□□□ -0.68
SIK3-210ENST00000480468 ZFYVE28Q9HCC9 887 aa10.81□□□□□ -0.68
SIK3-210ENST00000480468 AGPAT4Q9NRZ5 378 aa10.81□□□□□ -0.68
SIK3-210ENST00000480468 THG1LQ9NWX6 298 aaKnown RBP10.81□□□□□ -0.68
SIK3-210ENST00000480468 CACNA2D2Q9NY47 1150 aa10.81□□□□□ -0.68
SIK3-210ENST00000480468 PKD2L1Q9P0L9 805 aa10.81□□□□□ -0.68
SIK3-210ENST00000480468 TMEM181Q9P2C4 612 aa10.81□□□□□ -0.68
SIK3-210ENST00000480468 SLC17A6Q9P2U8 582 aa10.81□□□□□ -0.68
SIK3-210ENST00000480468 DNMT3BQ9UBC3 853 aaKnown RBP10.81□□□□□ -0.68
SIK3-210ENST00000480468 SRP68Q9UHB9 627 aaKnown RBP10.81□□□□□ -0.68
SIK3-210ENST00000480468 AQP12BA6NM10 295 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 PIK3R2O00459 728 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 MED7O43513 233 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 MGEA5O60502 916 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 CHRNGP07510 517 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 IL4RP24394 825 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 SPRP35270 261 aaPredicted RBP10.8□□□□□ -0.68
SIK3-210ENST00000480468 LEPRP48357 1165 aaKnown RBP10.8□□□□□ -0.68
SIK3-210ENST00000480468 ACOT2P49753 483 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 SF3B4Q15427 424 aaKnown RBP eCLIP10.8□□□□□ -0.68
SIK3-210ENST00000480468 NEDD8Q15843 81 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 GLRA4Q5JXX5 417 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 LIPMQ5VYY2 423 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 GTF2IRD2BQ6EKJ0 949 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 FAM45BPQ6NSW5 357 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 C8orf82Q6P1X6 216 aaPredicted RBP10.8□□□□□ -0.68
SIK3-210ENST00000480468 ZYG11AQ6WRX3 759 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 GTF2IRD2Q86UP8 949 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 AQP12AQ8IXF9 295 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 PLD6Q8N2A8 252 aaKnown RBP10.8□□□□□ -0.68
SIK3-210ENST00000480468 PELI3Q8N2H9 469 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 PARP8Q8N3A8 854 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 DCLK2Q8N568 766 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 RDM1Q8NG50 284 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 OR5B17Q8NGF7 314 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 FAM45AQ8TCE6 357 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 GLT1D1Q96MS3 346 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 RBBP8Q99708 897 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 CNPY3Q9BT09 278 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 SEZ6LQ9BYH1 1024 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 MUC3BQ9H195 1237 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 NMRAL1Q9HBL8 299 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 EIF2B3Q9NR50 452 aaKnown RBP10.8□□□□□ -0.68
SIK3-210ENST00000480468 SACM1LQ9NTJ5 587 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 ATP11BQ9Y2G3 1177 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 SPO11Q9Y5K1 396 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 SAC3D1A6NKF1 404 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 TRPC5OSA6NMA1 111 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 KCNU1A8MYU2 1149 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 TNFRSF10AO00220 468 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 NPM3O75607 178 aaKnown RBP10.8□□□□□ -0.68
SIK3-210ENST00000480468 RPS6KA4O75676 772 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 CABYRO75952 493 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 MYO1DO94832 1006 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 IL18RAPO95256 599 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 PIGNO95427 931 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 PARNO95453 639 aaKnown RBP10.8□□□□□ -0.68
SIK3-210ENST00000480468 ITGBL1O95965 494 aaPredicted RBP10.8□□□□□ -0.68
SIK3-210ENST00000480468 TCEA1P23193 301 aaKnown RBP10.8□□□□□ -0.68
SIK3-210ENST00000480468 LIMK2P53671 638 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 KRT76Q01546 638 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 FRG1Q14331 258 aaKnown RBP10.8□□□□□ -0.68
SIK3-210ENST00000480468 SNX17Q15036 470 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 TIGD2Q4W5G0 525 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 ARL13AQ5H913 290 aaPredicted RBP10.8□□□□□ -0.68
SIK3-210ENST00000480468 TREML2Q5T2D2 321 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 TMTC4Q5T4D3 741 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 NXNQ6DKJ4 435 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 KRT27Q7Z3Y8 459 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 TFAP2DQ7Z6R9 452 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 CERS5Q8N5B7 392 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 DHRSXQ8N5I4 330 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 PCDH20Q8N6Y1 951 aaKnown RBP10.8□□□□□ -0.68
SIK3-210ENST00000480468 ANKRD52Q8NB46 1076 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 AGR3Q8TD06 166 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 SNX19Q92543 992 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 CENPNQ96H22 339 aaPredicted RBP10.8□□□□□ -0.68
SIK3-210ENST00000480468 MTG1Q9BT17 334 aaPredicted RBP10.8□□□□□ -0.68
SIK3-210ENST00000480468 TRIM15Q9C019 465 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 SIAEQ9HAT2 523 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 PDLIM7Q9NR12 457 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 POLLQ9UGP5 575 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 CYTH4Q9UIA0 394 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 RBMX2Q9Y388 322 aaKnown RBP10.8□□□□□ -0.68
SIK3-210ENST00000480468 AFG3L2Q9Y4W6 797 aa10.8□□□□□ -0.68
SIK3-210ENST00000480468 EIF3FO00303 357 aaPredicted RBP10.79□□□□□ -0.68
SIK3-210ENST00000480468 AREL1O15033 823 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 PLA2G6O60733 806 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 GMNNO75496 209 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 SEC24DO94855 1032 aaPredicted RBP10.79□□□□□ -0.68
SIK3-210ENST00000480468 LTFP02788 710 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 HMGCRP04035 888 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 NTRK1P04629 796 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 NCAM1P13591 858 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 EEF1DP29692 281 aaKnown RBP10.79□□□□□ -0.68
SIK3-210ENST00000480468 RCVRNP35243 200 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 GRIA1P42261 906 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 SCNN1DP51172 638 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 GRM1Q13255 1194 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 CBX2Q14781 532 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms