RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 CCNI2Q6ZMN8 369 aaPredicted RBP17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 SETD3Q86TU7 594 aaPredicted RBP17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 NEK11Q8NG66 645 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 FAM172AQ8WUF8 416 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 FAM131CQ96AQ9 280 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 HAPLN3Q96S86 360 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 PPP1R9BQ96SB3 815 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 CDC6Q99741 560 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 HSD3B7Q9H2F3 369 aa17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 ZFR2Q9UPR6 939 aaKnown RBP17.77■□□□□ 0.43
ECHDC1-216ENST00000479525 ANKRD36A6QL64 1941 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 LRRK1Q38SD2 2015 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 C2CD4BA6NLJ0 364 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 PCDHGA12O60330 932 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 ZMPSTE24O75844 475 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 UNGP13051 313 aaPredicted RBP17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 EPHA8P29322 1005 aaPredicted RBP17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 SDC4P31431 198 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 RFC1P35251 1148 aaPredicted RBP17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 GNA12Q03113 381 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 STX1AQ16623 288 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 LRRC73Q5JTD7 316 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 SAP25Q8TEE9 199 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 CNDP2Q96KP4 475 aaKnown RBP17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 C1orf74Q96LT6 269 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 ZDHHC6Q9H6R6 413 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 ANO10Q9NW15 660 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 ADAM22Q9P0K1 906 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 OR12D3Q9UGF7 316 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 IL36AQ9UHA7 158 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 LIMA1Q9UHB6 759 aaKnown RBP17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 PAXBP1Q9Y5B6 917 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 WASF2Q9Y6W5 498 aa17.76■□□□□ 0.43
ECHDC1-216ENST00000479525 CHD6Q8TD26 2715 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 FAM221BA6H8Z2 402 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 LGALS16A8MUM7 142 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 TEX33O43247 280 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 TNFSF14O43557 240 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 PCDH8O95206 1070 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 CD160O95971 181 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 CAPNS1P04632 268 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 CDK11BP21127 795 aaKnown RBP17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 ADRA1BP35368 520 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 SERPINH1P50454 418 aaKnown RBP17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 VASPP50552 380 aaPredicted RBP17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 HDAC4P56524 1084 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 MYL5Q02045 173 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 NCAPHQ15003 741 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 CLEC16AQ2KHT3 1053 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 CT47A1Q5JQC4 288 aaPredicted RBP17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 WDR59Q6PJI9 974 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 C19orf48Q6RUI8 117 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 APTXQ7Z2E3 356 aaKnown RBP17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 ZNF677Q86XU0 584 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 RYBPQ8N488 228 aaPredicted RBP17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 GBP4Q96PP9 640 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 SELENOOQ9BVL4 669 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 DYRK4Q9NR20 520 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 GGT7Q9UJ14 662 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 NEU3Q9UQ49 428 aa17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 FARP1Q9Y4F1 1045 aaPredicted RBP17.75■□□□□ 0.43
ECHDC1-216ENST00000479525 ILVBLA1L0T0 632 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 TMEM8BA6NDV4 472 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 ENC1O14682 589 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 ALOX15BO15296 676 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 CCP110O43303 1012 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 LRIG2O94898 1065 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 NSFP46459 744 aaKnown RBP17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 CCNHP51946 323 aaPredicted RBP17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 MTA1Q13330 715 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 STAT4Q14765 748 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 ZNF542PQ5EBM4 170 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 MANEALQ5VSG8 457 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 SCYL2Q6P3W7 929 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 TMPRSS7Q7RTY8 843 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 TRIM69Q86WT6 500 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 ZNF354CQ86Y25 554 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 SKA1Q96BD8 255 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 CALN1Q9BXU9 219 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 KLC2Q9H0B6 622 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 TAS2R14Q9NYV8 317 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 TMEM63CQ9P1W3 806 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 ITM2BQ9Y287 266 aa17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 DSPP15924 2871 aaKnown RBP17.74■□□□□ 0.43
ECHDC1-216ENST00000479525 TMCO5BA8MYB1 307 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 SLC7A4O43246 635 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 ATMINO43313 823 aaPredicted RBP17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 DKK1O94907 266 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 LDOC1O95751 146 aaPredicted RBP17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 THEGLP0DJG4 465 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 KRT3P12035 628 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 MYF5P13349 255 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 GPD1P21695 349 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 RECQLP46063 649 aaPredicted RBP17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 RPL7AP62424 266 aaKnown RBP17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 FGL2Q14314 439 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 ZNF284Q2VY69 593 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 SETMARQ53H47 684 aaPredicted RBP17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 SLC45A4Q5BKX6 768 aa17.73■□□□□ 0.43
ECHDC1-216ENST00000479525 ATXN7L2Q5T6C5 722 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms