RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 CRTC1Q6UUV9 634 aa16.47■□□□□ 0.23
DDX56-210ENST00000479440 OR2A12Q8NGT7 310 aa16.47■□□□□ 0.23
DDX56-210ENST00000479440 STK32AQ8WU08 396 aa16.47■□□□□ 0.23
DDX56-210ENST00000479440 BTN2A2Q8WVV5 523 aa16.47■□□□□ 0.23
DDX56-210ENST00000479440 IL12RB2Q99665 862 aa16.47■□□□□ 0.23
DDX56-210ENST00000479440 THAP9Q9H5L6 903 aa16.47■□□□□ 0.23
DDX56-210ENST00000479440 SYNDIG1Q9H7V2 258 aa16.47■□□□□ 0.23
DDX56-210ENST00000479440 CAAP1Q9H8G2 361 aa16.47■□□□□ 0.23
DDX56-210ENST00000479440 DDIT4Q9NX09 232 aa16.47■□□□□ 0.23
DDX56-210ENST00000479440 IL36AQ9UHA7 158 aa16.47■□□□□ 0.23
DDX56-210ENST00000479440 OR51B4Q9Y5P0 310 aa16.47■□□□□ 0.23
DDX56-210ENST00000479440 SYNJ2BP-COX16A0A087WUM0 186 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 E5RJQ4 531 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 RNF225M0QZC1 329 aaPredicted RBP16.46■□□□□ 0.23
DDX56-210ENST00000479440 MUSKO15146 869 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 GJB6O95452 261 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 ITGB2P05107 769 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 SFTPCP11686 197 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 RECQLP46063 649 aaPredicted RBP16.46■□□□□ 0.23
DDX56-210ENST00000479440 FMO5P49326 533 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 CDK17Q00537 523 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 SRSF1Q07955 248 aaKnown RBP eCLIP16.46■□□□□ 0.234e-7■□□□□ 8.4
DDX56-210ENST00000479440 CETN1Q12798 172 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 EIF4EBP2Q13542 120 aaPredicted RBP16.46■□□□□ 0.23
DDX56-210ENST00000479440 PDE1CQ14123 709 aaPredicted RBP16.46■□□□□ 0.23
DDX56-210ENST00000479440 SPIDRQ14159 915 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 KRBA2Q6ZNG9 492 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 USP53Q70EK8 1073 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 EXD3Q8N9H8 876 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 OR52K2Q8NGK3 314 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 GRIN3AQ8TCU5 1115 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 LMX1AQ8TE12 382 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 LIN37Q96GY3 246 aaPredicted RBP16.46■□□□□ 0.23
DDX56-210ENST00000479440 BMFQ96LC9 184 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 SPATA32Q96LK8 384 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 SLC17A9Q9BYT1 436 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 RMND1Q9NWS8 449 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 COX16Q9P0S2 106 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 VANGL2Q9ULK5 521 aa16.46■□□□□ 0.23
DDX56-210ENST00000479440 FAM237AA0A1B0GTK4 181 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 FPGTO14772 594 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 MED7O43513 233 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 CALCAP01258 141 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 HSP90AA1P07900 732 aaKnown RBP16.45■□□□□ 0.22
DDX56-210ENST00000479440 RHOCP08134 193 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 JUNDP17535 347 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 CDH4P55283 916 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 PITX1P78337 314 aaPredicted RBP16.45■□□□□ 0.22
DDX56-210ENST00000479440 EIF3IQ13347 325 aaKnown RBP16.45■□□□□ 0.22
DDX56-210ENST00000479440 AUHQ13825 339 aaKnown RBP16.45■□□□□ 0.22
DDX56-210ENST00000479440 PERM1Q5SV97 790 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 C22orf39Q6P5X5 142 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 ZNF574Q6ZN55 896 aaPredicted RBP16.45■□□□□ 0.22
DDX56-210ENST00000479440 DCAF4L2Q8NA75 395 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 KAT5Q92993 513 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 SGF29Q96ES7 293 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 TBATAQ96M53 351 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 BOCQ9BWV1 1114 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 SLC4A5Q9BY07 1137 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 METTL14Q9HCE5 456 aaKnown RBP16.45■□□□□ 0.22
DDX56-210ENST00000479440 STARD5Q9NSY2 213 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 SPASTQ9UBP0 616 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 APOBEC3BQ9UH17 382 aaKnown RBP16.45■□□□□ 0.22
DDX56-210ENST00000479440 VPS51Q9UID3 782 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 TBC1D30Q9Y2I9 924 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 PCDHGA7Q9Y5G6 932 aa16.45■□□□□ 0.22
DDX56-210ENST00000479440 HECTD1Q9ULT8 2610 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 PMS2P1A4D2B8 440 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 POM121BA6NF01 834 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 PMM2O15305 246 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 NTRK1P04629 796 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 ADRB3P13945 408 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 RRM1P23921 792 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 PDX1P52945 283 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 INHBCP55103 352 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 GCNT1Q02742 428 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 LRRC63Q05C16 580 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 DRAP1Q14919 205 aaPredicted RBP16.44■□□□□ 0.22
DDX56-210ENST00000479440 LINC00303Q3SY05 128 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 CHST14Q8NCH0 376 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 FEM1CQ96JP0 617 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 CCDC3Q9BQI4 270 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 HS3ST4Q9Y661 456 aa16.44■□□□□ 0.22
DDX56-210ENST00000479440 NAV2Q8IVL1 2488 aa16.43■□□□□ 0.22
DDX56-210ENST00000479440 PLD2O14939 933 aa16.43■□□□□ 0.22
DDX56-210ENST00000479440 P4HA2O15460 535 aa16.43■□□□□ 0.22
DDX56-210ENST00000479440 SNAP91O60641 907 aa16.43■□□□□ 0.22
DDX56-210ENST00000479440 LEFTY1O75610 366 aa16.43■□□□□ 0.22
DDX56-210ENST00000479440 PAK4O96013 591 aaPredicted RBP16.43■□□□□ 0.22
DDX56-210ENST00000479440 MT-CO1P00395 513 aa16.43■□□□□ 0.22
DDX56-210ENST00000479440 GLI1P08151 1106 aa16.43■□□□□ 0.22
DDX56-210ENST00000479440 ITGB7P26010 798 aa16.43■□□□□ 0.22
DDX56-210ENST00000479440 IRAK1P51617 712 aa16.43■□□□□ 0.22
DDX56-210ENST00000479440 PTK2BQ14289 1009 aa16.43■□□□□ 0.22
DDX56-210ENST00000479440 COBLL1Q53SF7 1204 aa16.43■□□□□ 0.22
DDX56-210ENST00000479440 ARSIQ5FYB1 569 aa16.43■□□□□ 0.22
DDX56-210ENST00000479440 ESRP1Q6NXG1 681 aaKnown RBP16.43■□□□□ 0.22
DDX56-210ENST00000479440 DENND1BQ6P3S1 775 aa16.43■□□□□ 0.22
DDX56-210ENST00000479440 TMEM110Q86TL2 294 aa16.43■□□□□ 0.22
DDX56-210ENST00000479440 JAMLQ86YT9 394 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms