RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 RIOK3O14730 519 aaKnown RBP12.54□□□□□ -0.4
HDAC8-217ENST00000478743 ZBED1O96006 694 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 FGF3P11487 239 aaPredicted RBP12.54□□□□□ -0.4
HDAC8-217ENST00000478743 PDGFRAP16234 1089 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 CD58P19256 250 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 DLG4P78352 724 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 ALCAMQ13740 583 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 PTK2BQ14289 1009 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 RILPL1Q5EBL4 403 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 EFHC2Q5JST6 749 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 FAM46CQ5VWP2 391 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 PM20D1Q6GTS8 502 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 ESRP1Q6NXG1 681 aaKnown RBP12.54□□□□□ -0.4
HDAC8-217ENST00000478743 ASB18Q6ZVZ8 466 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 DCP2Q8IU60 420 aaKnown RBP12.54□□□□□ -0.4
HDAC8-217ENST00000478743 CACNA2D3Q8IZS8 1091 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 OR52K2Q8NGK3 314 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 PRR7Q8TB68 274 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 SLC45A3Q96JT2 553 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 CMKLR1Q99788 373 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 PANK4Q9NVE7 773 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 IPO11Q9UI26 975 aaKnown RBP12.54□□□□□ -0.4
HDAC8-217ENST00000478743 MAP4K5Q9Y4K4 846 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 B3GALT1Q9Y5Z6 326 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 HS3ST3A1Q9Y663 406 aa12.54□□□□□ -0.4
HDAC8-217ENST00000478743 MRPS18BQ9Y676 258 aaKnown RBP12.54□□□□□ -0.4
HDAC8-217ENST00000478743 IRAK2O43187 625 aa12.53□□□□□ -0.4
HDAC8-217ENST00000478743 RAD1O60671 282 aa12.53□□□□□ -0.4
HDAC8-217ENST00000478743 RABIFP47224 123 aa12.53□□□□□ -0.4
HDAC8-217ENST00000478743 PFN3P60673 137 aa12.53□□□□□ -0.4
HDAC8-217ENST00000478743 NADK2Q4G0N4 442 aa12.53□□□□□ -0.4
HDAC8-217ENST00000478743 ZNF394Q53GI3 561 aa12.53□□□□□ -0.4
HDAC8-217ENST00000478743 MS4A13Q5J8X5 152 aa12.53□□□□□ -0.4
HDAC8-217ENST00000478743 BSPRYQ5W0U4 402 aa12.53□□□□□ -0.4
HDAC8-217ENST00000478743 KCTD16Q68DU8 428 aa12.53□□□□□ -0.4
HDAC8-217ENST00000478743 NEK5Q6P3R8 708 aa12.53□□□□□ -0.4
HDAC8-217ENST00000478743 CHST14Q8NCH0 376 aa12.53□□□□□ -0.4
HDAC8-217ENST00000478743 CDH19Q9H159 772 aa12.53□□□□□ -0.4
HDAC8-217ENST00000478743 RDH14Q9HBH5 336 aa12.53□□□□□ -0.4
HDAC8-217ENST00000478743 KIAA1586Q9HCI6 787 aa12.53□□□□□ -0.4
HDAC8-217ENST00000478743 OLA1Q9NTK5 396 aaKnown RBP12.53□□□□□ -0.4
HDAC8-217ENST00000478743 GGT7Q9UJ14 662 aa12.53□□□□□ -0.4
HDAC8-217ENST00000478743 KPNA3O00505 521 aaPredicted RBP12.52□□□□□ -0.41
HDAC8-217ENST00000478743 MCF2LO15068 1137 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 ZNF18P17022 549 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 ADIGQ0VDE8 80 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 DLG2Q15700 870 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 ACCSLQ4AC99 568 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 MCTP1Q6DN14 999 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 TCTN3Q6NUS6 607 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 C16orf46Q6P387 395 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 SPRED1Q7Z699 444 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 FAM184AQ8NB25 1140 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 GPBAR1Q8TDU6 330 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 RNF139Q8WU17 664 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 TATDN2Q93075 761 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 FCRL2Q96LA5 508 aaPredicted RBP12.52□□□□□ -0.41
HDAC8-217ENST00000478743 NT5C1AQ9BXI3 368 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 SLC17A9Q9BYT1 436 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 ITGB1BP2Q9UKP3 347 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 KCNMB2Q9Y691 235 aa12.52□□□□□ -0.41
HDAC8-217ENST00000478743 ATP9BO43861 1147 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 GABBR2O75899 941 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 MOCS3O95396 460 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 ASS1P00966 412 aaKnown RBP12.51□□□□□ -0.41
HDAC8-217ENST00000478743 FURINP09958 794 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 IGFALSP35858 605 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 SLC11A2P49281 568 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 NEK4P51957 841 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 MSANTD2Q6P1R3 559 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 TMEM135Q86UB9 458 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 XYLT1Q86Y38 959 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 NELFCDQ8IXH7 590 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 LGI2Q8N0V4 545 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 MMP21Q8N119 569 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 ZNF557Q8N988 423 aaPredicted RBP12.51□□□□□ -0.41
HDAC8-217ENST00000478743 XXYLT1Q8NBI6 393 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 BTN2A2Q8WVV5 523 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 ART4Q93070 314 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 TMEM159Q96B96 161 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 RNF31Q96EP0 1072 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 HEXIM2Q96MH2 286 aaKnown RBP12.51□□□□□ -0.41
HDAC8-217ENST00000478743 NUDT22Q9BRQ3 303 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 LLPHQ9BRT6 129 aaKnown RBP12.51□□□□□ -0.41
HDAC8-217ENST00000478743 GPN2Q9H9Y4 310 aaPredicted RBP12.51□□□□□ -0.41
HDAC8-217ENST00000478743 LUZP4Q9P127 313 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 STK17AQ9UEE5 414 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 ITM2BQ9Y287 266 aa12.51□□□□□ -0.41
HDAC8-217ENST00000478743 ALOX15BO15296 676 aa12.5□□□□□ -0.41
HDAC8-217ENST00000478743 SORBS2O94875 1100 aaKnown RBP12.5□□□□□ -0.41
HDAC8-217ENST00000478743 MOCS2O96007 188 aaPredicted RBP12.5□□□□□ -0.41
HDAC8-217ENST00000478743 HOXB4P17483 251 aaPredicted RBP12.5□□□□□ -0.41
HDAC8-217ENST00000478743 LONP1P36776 959 aaKnown RBP12.5□□□□□ -0.41
HDAC8-217ENST00000478743 IRAK1P51617 712 aa12.5□□□□□ -0.41
HDAC8-217ENST00000478743 TBX4P57082 545 aa12.5□□□□□ -0.41
HDAC8-217ENST00000478743 RAP1GAP2Q684P5 730 aa12.5□□□□□ -0.41
HDAC8-217ENST00000478743 CXorf57Q6NSI4 855 aaKnown RBP12.5□□□□□ -0.41
HDAC8-217ENST00000478743 EPM2AIP1Q7L775 607 aaPredicted RBP12.5□□□□□ -0.41
HDAC8-217ENST00000478743 TIPARPQ7Z3E1 657 aaKnown RBP12.5□□□□□ -0.41
HDAC8-217ENST00000478743 CCDC13Q8IYE1 715 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms