RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 SLIT1O75093 1534 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 RRBP1Q9P2E9 1410 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 SPATA31A1Q5TZJ5 1347 aa4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 ZNF644Q9H582 1327 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-212ENST00000478573 DIP2AQ14689 1571 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 NWD1Q149M9 1564 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 ROCK1Q13464 1354 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 ANKRD30AQ9BXX3 1397 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 TBC1D3DA0A087WVF3 549 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 TBC1D3IA0A087WXS9 549 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 TBC1D3EA0A087X179 549 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 TBC1D3KA0A087X1G2 549 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 TBC1D3BA6NDS4 549 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 TBC1D3FA6NER0 549 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 FAM90A8PA6NJQ4 464 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 A6NLC8 198 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 TBC1D3LB9A6J9 549 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 PRR23D1E9PI22 279 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 INPPL1O15357 1258 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 TOMM40O96008 361 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 FAM90A13PP0C7W8 464 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 FAM90A24PP0C7X0 464 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 TBC1D3HP0C7X1 549 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 PRR23D2P0DMB1 279 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 CHN1P15882 459 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 ELF1P32519 619 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 GALNSP34059 522 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 GRK5P34947 590 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 PNPLA4P41247 253 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 PCP4P48539 62 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 RCAN1P53805 252 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 KRTAP10-6P60371 365 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 SRSF1Q07955 248 aaKnown RBP eCLIP4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 MTX1Q13505 466 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 WDR45BQ5MNZ6 344 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 TBC1D3GQ6DHY5 549 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 TBC1D3CQ6IPX1 549 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 LAS2Q8IYD9 372 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 TBC1D3Q8IZP1 549 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 SMRP1Q8NCR6 262 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 THOC3Q96J01 351 aaKnown RBP4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 HIC2Q96JB3 615 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 GPR63Q9BZJ6 419 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 ZHX3Q9H4I2 956 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 PLEKHA2Q9HB19 425 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 ARL8BQ9NVJ2 186 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 RCE1Q9Y256 329 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 PCDHA10Q9Y5I2 948 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 TMEM131LA2VDJ0 1609 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 CPS1P31327 1500 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 PPLO60437 1756 aa4.45□□□□□ -1.7
CDC42BPA-212ENST00000478573 MED14O60244 1454 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 ARHGAP23Q9P227 1491 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 SETD1AO15047 1707 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 TNRQ92752 1358 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 AGAP5A6NIR3 686 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 CNOT3O75175 753 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 ALDOAP04075 364 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 TSPY4P0CV99 314 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 TSPY10P0CW01 314 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 TNNT1P13805 278 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 CDKN2AP42771 156 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 RXRGP48443 463 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 TUBP50607 506 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 GEMIN4P57678 1058 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 HSF1Q00613 529 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 RNASELQ05823 741 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 THOC5Q13769 683 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 ERV3-1Q14264 604 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 CBWD5Q5RIA9 395 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 NAA35Q5VZE5 725 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 DENND1BQ6P3S1 775 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 TMEM88Q6PEY1 159 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 KYAT3Q6YP21 454 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 HEATR4Q86WZ0 1026 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 ELOVL1Q9BW60 279 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 SLC26A6Q9BXS9 759 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 ARHGAP39Q9C0H5 1083 aa4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 COPG1Q9Y678 874 aaKnown RBP4.44□□□□□ -1.7
CDC42BPA-212ENST00000478573 B4E171 279 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 MBD4O95243 580 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 CSF1P09603 554 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 ACP5P13686 325 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 TNFAIP3P21580 790 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 PSMC2P35998 433 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 TSPAN7P41732 249 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 NR1H2P55055 460 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 WDR5P61964 334 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 HYIQ5T013 277 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 SLC39A5Q6ZMH5 540 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 RSRC2Q7L4I2 434 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 MAATS1Q7Z4T9 603 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 PCGF5Q86SE9 256 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 MMP21Q8N119 569 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 SRFBP1Q8NEF9 429 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 LINS1Q8NG48 757 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 CLEC4CQ8WTT0 213 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 AKAP1Q92667 903 aaKnown RBP eCLIP4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 ARRDC3Q96B67 414 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms