RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 IFT43Q96FT9 208 aa14.75□□□□□ -0.05
SMARCE1-209ENST00000478349 LRIG1Q96JA1 1093 aa14.75□□□□□ -0.05
SMARCE1-209ENST00000478349 PCMTD1Q96MG8 357 aaPredicted RBP14.75□□□□□ -0.05
SMARCE1-209ENST00000478349 GBP4Q96PP9 640 aa14.75□□□□□ -0.05
SMARCE1-209ENST00000478349 HEPHQ9BQS7 1158 aa14.75□□□□□ -0.05
SMARCE1-209ENST00000478349 FAM207AQ9NSI2 230 aaPredicted RBP14.75□□□□□ -0.05
SMARCE1-209ENST00000478349 OR12D3Q9UGF7 316 aa14.75□□□□□ -0.05
SMARCE1-209ENST00000478349 GPSM3Q9Y4H4 160 aa14.75□□□□□ -0.05
SMARCE1-209ENST00000478349 NUMA1Q14980 2115 aa14.75□□□□□ -0.05
SMARCE1-209ENST00000478349 COL5A1P20908 1838 aaPredicted RBP14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 NEMP2A6NFY4 417 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 ZSCAN5CA6NGD5 496 aaPredicted RBP14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 A6NNZ2 444 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 WNT9AO14904 365 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 SLC31A1O15431 190 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 ENDOD1O94919 500 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 CALB1P05937 261 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 CTSLP07711 333 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 CCDC172P0C7W6 258 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 RHOQP17081 205 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 PTPN9P43378 593 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 DNA2P51530 1060 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 POLR2FP61218 127 aaKnown RBP14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 RPS21P63220 83 aaKnown RBP14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 DAB2P98082 770 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 E2F1Q01094 437 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 SHBQ15464 509 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 CARD16Q5EG05 197 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 RWDD4Q6NW29 188 aaKnown RBP14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 DPY19L2P1Q6NXN4 242 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 DPY19L3Q6ZPD9 716 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 BNIPLQ7Z465 357 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 DRC7Q8IY82 874 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 TMEM145Q8NBT3 493 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 OR7D4Q8NG98 312 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 RAB7BQ96AH8 199 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 ISG20Q96AZ6 181 aaKnown RBP14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 FEM1CQ96JP0 617 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 CALN1Q9BXU9 219 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 GANQ9H2C0 597 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 TNKS2Q9H2K2 1166 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 KLHL11Q9NVR0 708 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 NOCTQ9UK39 431 aaKnown RBP14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 AKAP13Q12802 2813 aa14.74□□□□□ -0.05
SMARCE1-209ENST00000478349 ZFHX4Q86UP3 3567 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 H3BM21 787 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 K7ERQ8 282 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 TAF4O00268 1085 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 NEMP1O14524 444 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 AP1G1O43747 822 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 RAMP2O60895 175 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 LEFTY1O75610 366 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 CYP1A1P04798 512 aaPredicted RBP14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 KRT3P12035 628 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 ADRB3P13945 408 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 PRLRP16471 622 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 ADRA1BP35368 520 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 TAS2R38P59533 333 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 CYP4F3Q08477 520 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 SGCGQ13326 291 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 ZNF211Q13398 564 aaPredicted RBP14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 KRT31Q15323 416 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 CDO1Q16878 200 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 ARSIQ5FYB1 569 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 CDKAL1Q5VV42 579 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 PPP1R2P3Q6NXS1 205 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 SASS6Q6UVJ0 657 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 SPATS2Q86XZ4 545 aaKnown RBP14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 PLPP6Q8IY26 295 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 RYBPQ8N488 228 aaPredicted RBP14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 NEK11Q8NG66 645 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 ARRDC3Q96B67 414 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 TBC1D31Q96DN5 1066 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 C11orf70Q9BRQ4 267 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 SELENOOQ9BVL4 669 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 OSBPL1AQ9BXW6 950 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 OSBPL2Q9H1P3 480 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 MAGEH1Q9H213 219 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 VPS16Q9H269 839 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 USP29Q9HBJ7 922 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 ANLNQ9NQW6 1124 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 ANO10Q9NW15 660 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 DONSONQ9NYP3 566 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 NCKIPSDQ9NZQ3 722 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 RAXQ9Y2V3 346 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 SNX10Q9Y5X0 201 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 CFAP47Q6ZTR5 3102 aa14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 ANKRD11Q6UB99 2663 aaPredicted RBP14.73□□□□□ -0.05
SMARCE1-209ENST00000478349 FAM149AA5PLN7 773 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 I6L893 689 aaPredicted RBP14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 SMAD6O43541 496 aaKnown RBP14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 TSPAN6O43657 245 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 ACP1P24666 158 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 L1CAMP32004 1257 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 CCNHP51946 323 aaPredicted RBP14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 GSCP56915 257 aaPredicted RBP14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 HNRNPKP61978 463 aaKnown RBP eCLIP14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 SNRPD1P62314 119 aaKnown RBP14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 RAD51Q06609 339 aa14.72□□□□□ -0.05
SMARCE1-209ENST00000478349 DNAJC3Q13217 504 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms