RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 MAPK15Q8TD08 544 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 ARRDC3Q96B67 414 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 PPP1R16AQ96I34 528 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 PPP1R13BQ96KQ4 1090 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 PSMB7Q99436 277 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 MYOCQ99972 504 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 SRRTQ9BXP5 876 aaKnown RBP9.88□□□□□ -0.83
CCM2-210ENST00000478169 INTS2Q9H0H0 1204 aaKnown RBP9.88□□□□□ -0.83
CCM2-210ENST00000478169 GDPD2Q9HCC8 539 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 CPNE5Q9HCH3 593 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 UBE2TQ9NPD8 197 aaPredicted RBP9.88□□□□□ -0.83
CCM2-210ENST00000478169 ASCL3Q9NQ33 180 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 GPR27Q9NS67 375 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 TMEM51Q9NW97 253 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 DNAJC28Q9NX36 388 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 COX16Q9P0S2 106 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 ZFR2Q9UPR6 939 aaKnown RBP9.88□□□□□ -0.83
CCM2-210ENST00000478169 CSNK1G3Q9Y6M4 447 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 U3KQA8 63 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 PIEZO2Q9H5I5 2752 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 NAV2Q8IVL1 2488 aa9.88□□□□□ -0.83
CCM2-210ENST00000478169 UNC13CQ8NB66 2214 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 SPTY2D1-AS1A0A0U1RR47 76 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 H3BM21 787 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 KLK10O43240 276 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 CSF2P04141 144 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 RHOCP08134 193 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 NME1P15531 152 aaKnown RBP9.87□□□□□ -0.83
CCM2-210ENST00000478169 CD44P16070 742 aaKnown RBP9.87□□□□□ -0.83
CCM2-210ENST00000478169 NOS2P35228 1153 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 RECQLP46063 649 aaPredicted RBP9.87□□□□□ -0.83
CCM2-210ENST00000478169 CLDN2P57739 230 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 RPS21P63220 83 aaKnown RBP9.87□□□□□ -0.83
CCM2-210ENST00000478169 NME3Q13232 169 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 ISXQ2M1V0 245 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 ACBD5Q5T8D3 534 aaPredicted RBP9.87□□□□□ -0.83
CCM2-210ENST00000478169 SEL1L3Q68CR1 1132 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 KIAA1161Q6NSJ0 714 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 ZCCHC8Q6NZY4 707 aaKnown RBP9.87□□□□□ -0.83
CCM2-210ENST00000478169 KYAT3Q6YP21 454 aaKnown RBP9.87□□□□□ -0.83
CCM2-210ENST00000478169 C11orf57Q6ZUT1 292 aaPredicted RBP9.87□□□□□ -0.83
CCM2-210ENST00000478169 C14orf80Q86SX3 495 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 ZSCAN30Q86W11 494 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 WDTC1Q8N5D0 677 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 DCAF4L2Q8NA75 395 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 ZNF548Q8NEK5 533 aaPredicted RBP9.87□□□□□ -0.83
CCM2-210ENST00000478169 TPCN2Q8NHX9 752 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 IFI44Q8TCB0 444 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 NELFBQ8WX92 580 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 TTC9Q92623 222 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 CCDC97Q96F63 343 aaPredicted RBP9.87□□□□□ -0.83
CCM2-210ENST00000478169 VCPIP1Q96JH7 1222 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 FEM1CQ96JP0 617 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 BMFQ96LC9 184 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 SLC46A1Q96NT5 459 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 NOX5Q96PH1 765 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 CPXM1Q96SM3 734 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 SLC17A9Q9BYT1 436 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 SIK2Q9H0K1 926 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 OSBPL2Q9H1P3 480 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 FZD3Q9NPG1 666 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 RRN3Q9NYV6 651 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 IL36AQ9UHA7 158 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 VPS51Q9UID3 782 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 SALL4Q9UJQ4 1053 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 PCDHGC3Q9UN70 934 aa9.87□□□□□ -0.83
CCM2-210ENST00000478169 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCM2-210ENST00000478169 AHCTF1Q8WYP5 2266 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 SPTA1P02549 2419 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 EME2A4GXA9 379 aaPredicted RBP9.86□□□□□ -0.83
CCM2-210ENST00000478169 DRGXA6NNA5 263 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 PPP1R3GB7ZBB8 358 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 B8ZZF3 427 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 K7ERQ8 282 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 M0QYT0 321 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 TPP1O14773 563 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 SMAD6O43541 496 aaKnown RBP9.86□□□□□ -0.83
CCM2-210ENST00000478169 SNAP91O60641 907 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 DAB1O75553 588 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 LEFTY1O75610 366 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 GRAP2O75791 330 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 NEBLO76041 1014 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 CNTN5O94779 1100 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 MYF5P13349 255 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 C6P13671 934 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 TGM2P21980 687 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 RRM1P23921 792 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 RBMS1P29558 406 aaKnown RBP9.86□□□□□ -0.83
CCM2-210ENST00000478169 MLLT3P42568 568 aaPredicted RBP9.86□□□□□ -0.83
CCM2-210ENST00000478169 RABIFP47224 123 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 CXCR3P49682 368 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 NEK3P51956 506 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 SLC6A3Q01959 620 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 SLC20A2Q08357 652 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 FZD2Q14332 565 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 ALFQ53S48 1182 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 ZNF542PQ5EBM4 170 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 ARSIQ5FYB1 569 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 BRMS1LQ5PSV4 323 aa9.86□□□□□ -0.83
CCM2-210ENST00000478169 ISM2Q6H9L7 571 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms