RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 ZNF557Q8N988 423 aaPredicted RBP18.81■□□□□ 0.6
VARS2-209ENST00000477288 DDX18Q9NVP1 670 aaKnown RBP18.81■□□□□ 0.6
VARS2-209ENST00000477288 DNMT3LQ9UJW3 386 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 PIK3CGP48736 1102 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 DMPKQ09013 629 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 RBBP4Q09028 425 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 SEC23AQ15436 765 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 SERPINA13PQ6UXR4 307 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 FBXO30Q8TB52 745 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 HNRNPLLQ8WVV9 542 aaKnown RBP18.81■□□□□ 0.6
VARS2-209ENST00000477288 C2orf49Q9BVC5 232 aaPredicted RBP18.81■□□□□ 0.6
VARS2-209ENST00000477288 OXCT2Q9BYC2 517 aaPredicted RBP18.81■□□□□ 0.6
VARS2-209ENST00000477288 ARHGAP20Q9P2F6 1191 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 KLQ9UEF7 1012 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 A0A087X1B8 175 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 FCHO1O14526 889 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 TBL1XO60907 577 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 VPS4BO75351 444 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 PTPN1P18031 435 aaKnown RBP18.81■□□□□ 0.6
VARS2-209ENST00000477288 EPORP19235 508 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 MIPP30301 263 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 MTAPQ13126 283 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 DGUOKQ16854 277 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 USP50Q70EL3 339 aaPredicted RBP18.81■□□□□ 0.6
VARS2-209ENST00000477288 DENND1CQ8IV53 801 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 EFCAB3Q8N7B9 438 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 QRFPRQ96P65 431 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 ITSN1Q15811 1721 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 BIRC5O15392 142 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 ANXA6P08133 673 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 WARSP23381 471 aaKnown RBP18.81■□□□□ 0.6
VARS2-209ENST00000477288 HSPA14Q0VDF9 509 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 EML3Q32P44 896 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 HECTD3Q5T447 861 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 RBM43Q6ZSC3 357 aaKnown RBP18.81■□□□□ 0.6
VARS2-209ENST00000477288 APOPT1Q96IL0 206 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 ARMCX1Q9P291 453 aa18.81■□□□□ 0.6
VARS2-209ENST00000477288 HOXC6P09630 235 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 STK40Q8N2I9 435 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 CDRT15Q96T59 188 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 THAP1Q9NVV9 213 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 TRDMT1O14717 391 aaKnown RBP18.8■□□□□ 0.6
VARS2-209ENST00000477288 CABYRO75952 493 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 PDE9AO76083 593 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 KCNH1O95259 989 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 ATP6V1G2O95670 118 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 CATP04040 527 aaKnown RBP18.8■□□□□ 0.6
VARS2-209ENST00000477288 NTRK1P04629 796 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 HDCP19113 662 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 NEK3P51956 506 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 VGLL4Q14135 290 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 SAPCD2Q86UD0 394 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 ZC3H7AQ8IWR0 971 aaKnown RBP18.8■□□□□ 0.6
VARS2-209ENST00000477288 SMYD1Q8NB12 490 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 STARD8Q92502 1023 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 REEP1Q9H902 201 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 C1QTNF3-AMACRE9PGA6 284 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 PGK1P00558 417 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 HNMTP50135 292 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 FIGNQ5HY92 759 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 SPANXN2Q5MJ10 180 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 FAM220AQ7Z4H9 259 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 CHPFQ8IZ52 775 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 BTBD10Q9BSF8 475 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 ADCY6O43306 1168 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 ECDO95905 644 aaPredicted RBP18.8■□□□□ 0.6
VARS2-209ENST00000477288 CD86P42081 329 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 DGCR6Q14129 220 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 PACS1Q6VY07 963 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 RPTNQ6XPR3 784 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 TEKT5Q96M29 485 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 BPIFA1Q9NP55 256 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 LOC100506127A0A0U1RQW1 187 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 MTRF1O75570 445 aaKnown RBP18.8■□□□□ 0.6
VARS2-209ENST00000477288 PRLRP16471 622 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 KRT73Q86Y46 540 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 TMPRSS6Q8IU80 811 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 APLFQ8IW19 511 aaPredicted RBP18.8■□□□□ 0.6
VARS2-209ENST00000477288 FIBCD1Q8N539 461 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 ZNF276Q8N554 614 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 MARK4Q96L34 752 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 ASB8Q9H765 288 aa18.8■□□□□ 0.6
VARS2-209ENST00000477288 GPAT3Q53EU6 434 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 ZC3H12AQ5D1E8 599 aaKnown RBP18.79■□□□□ 0.6
VARS2-209ENST00000477288 RABGEF1Q9UJ41 708 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 ZNF232Q9UNY5 417 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.79■□□□□ 0.6
VARS2-209ENST00000477288 OR10H2O60403 315 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 KIAA0895Q8NCT3 520 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 HELQQ8TDG4 1101 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 SAE1Q9UBE0 346 aaPredicted RBP18.79■□□□□ 0.6
VARS2-209ENST00000477288 BUD23O43709 281 aaKnown RBP18.79■□□□□ 0.6
VARS2-209ENST00000477288 RBL1P28749 1068 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 ABL2P42684 1182 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 CLK3P49761 638 aaKnown RBP18.79■□□□□ 0.6
VARS2-209ENST00000477288 PRKAA2P54646 552 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 NIPA1Q7RTP0 329 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 ARMC8Q8IUR7 673 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 MST1RQ04912 1400 aa18.79■□□□□ 0.6
VARS2-209ENST00000477288 A0A0B4J269 797 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms