RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 LDB1Q86U70 411 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-221ENST00000477203 DENND6AQ8IWF6 608 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 PLD6Q8N2A8 252 aaKnown RBP13.62□□□□□ -0.23
HDAC7-221ENST00000477203 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.62□□□□□ -0.23
HDAC7-221ENST00000477203 LRRC39Q96DD0 335 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 LRRC37BQ96QE4 947 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 FRMD8Q9BZ67 464 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-221ENST00000477203 KDM4CQ9H3R0 1056 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 RRN3Q9NYV6 651 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 GGA2Q9UJY4 613 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 MTO1Q9Y2Z2 717 aaKnown RBP13.62□□□□□ -0.23
HDAC7-221ENST00000477203 XIRP2A4UGR9 3374 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 SF3B1O75533 1304 aaKnown RBP eCLIP13.62□□□□□ -0.233e-6■■■■□ 22.7
HDAC7-221ENST00000477203 MAFKO60675 156 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 GJB5O95377 273 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 LACTB2Q53H82 288 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-221ENST00000477203 MS4A13Q5J8X5 152 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 IL31Q6EBC2 164 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 ESRP1Q6NXG1 681 aaKnown RBP13.62□□□□□ -0.23
HDAC7-221ENST00000477203 FBXL22Q6P050 247 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 SH2D5Q6ZV89 423 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 RAPH1Q70E73 1250 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 NLRP9Q7RTR0 991 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 ARHGAP22Q7Z5H3 698 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 ZNF276Q8N554 614 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 DCLK2Q8N568 766 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 SERPINB11Q96P15 392 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 CATSPERBQ9H7T0 1116 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 NEU3Q9UQ49 428 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 PLLPQ9Y342 182 aa13.62□□□□□ -0.23
HDAC7-221ENST00000477203 hCG_2014768A0A024R1R8 64 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 ARHGEF37A1IGU5 675 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 VNN2O95498 520 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 KRT16P08779 473 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 ETV4P43268 484 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 CPA2P48052 419 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 DSC2Q02487 901 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 PRPSAP1Q14558 356 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 PTPRCAPQ14761 206 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 TAF12Q16514 161 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 TAF1BQ53T94 588 aaPredicted RBP13.61□□□□□ -0.23
HDAC7-221ENST00000477203 ITPRIPL1Q6GPH6 555 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 C4orf22Q6V702 233 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 KCNMB4Q86W47 210 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 NAF1Q96HR8 494 aaKnown RBP13.61□□□□□ -0.23
HDAC7-221ENST00000477203 LRRC40Q9H9A6 602 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 SP110Q9HB58 689 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 ARHGEF38Q9NXL2 777 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 HEY2Q9UBP5 337 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 SZT2Q5T011 3432 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 TM9SF1O15321 606 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 IGLV3-25P01717 112 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 CD86P42081 329 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 MLLT6P55198 1093 aaPredicted RBP13.61□□□□□ -0.23
HDAC7-221ENST00000477203 MPP1Q00013 466 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 ROR2Q01974 943 aaKnown RBP13.61□□□□□ -0.23
HDAC7-221ENST00000477203 SLC18A2Q05940 514 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 SETDB1Q15047 1291 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 CNGA3Q16281 694 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 FBXO22Q8NEZ5 403 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 CYP2S1Q96SQ9 504 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 TTPALQ9BTX7 342 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 PHACTR1Q9C0D0 580 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 NOL6Q9H6R4 1146 aaKnown RBP13.61□□□□□ -0.23
HDAC7-221ENST00000477203 PNPLA8Q9NP80 782 aa13.61□□□□□ -0.23
HDAC7-221ENST00000477203 ACRP10323 421 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 NQO1P15559 274 aaKnown RBP13.6□□□□□ -0.23
HDAC7-221ENST00000477203 SERPINB3P29508 390 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 OR1E1P30953 314 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 SESN3P58005 492 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 NCALDP61601 193 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 C16orf59Q7L2K0 433 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 ALKBH8Q96BT7 664 aaKnown RBP13.6□□□□□ -0.23
HDAC7-221ENST00000477203 SGF29Q96ES7 293 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 OSBPL2Q9H1P3 480 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 FBXO44Q9H4M3 255 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 PPCSQ9HAB8 311 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 CYP4F11Q9HBI6 524 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 TMEM216Q9P0N5 145 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 PRKAG3Q9UGI9 489 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 SCML2Q9UQR0 700 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 EYSQ5T1H1 3165 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 A0A0U1RQS6 177 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 NCAM2O15394 837 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 TROVE2P10155 538 aaKnown RBP eCLIP13.6□□□□□ -0.23
HDAC7-221ENST00000477203 MYL2P10916 166 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 ATF6P18850 670 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 AIF1P55008 147 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 RPS24P62847 133 aaKnown RBP13.6□□□□□ -0.23
HDAC7-221ENST00000477203 FASTKD1Q53R41 847 aaKnown RBP13.6□□□□□ -0.23
HDAC7-221ENST00000477203 SMYD5Q6GMV2 418 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 FSTL4Q6MZW2 842 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 ALYREFQ86V81 257 aaKnown RBP13.6□□□□□ -0.23
HDAC7-221ENST00000477203 NPAS4Q8IUM7 802 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 MFN1Q8IWA4 741 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 LGI2Q8N0V4 545 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 E2F7Q96AV8 911 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 SMIM14Q96QK8 99 aa13.6□□□□□ -0.23
HDAC7-221ENST00000477203 TSEN34Q9BSV6 310 aaKnown RBP13.6□□□□□ -0.23
HDAC7-221ENST00000477203 GLOD4Q9HC38 313 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms