RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 C16orf45Q96MC5 204 aaPredicted RBP11.88□□□□□ -0.51
LSM2-212ENST00000477182 WDR24Q96S15 920 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 NRSN2Q9GZP1 204 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 TKTL2Q9H0I9 626 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 MIR1-1HGQ9H1L0 117 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 WDCPQ9H6R7 721 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 GPATCH2LQ9NWQ4 482 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 CFAP97Q9P2B7 532 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 DEC1Q9P2X7 70 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 STARD13Q9Y3M8 1113 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 PTPN13Q12923 2485 aa11.88□□□□□ -0.51
LSM2-212ENST00000477182 KCNU1A8MYU2 1149 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 I6L893 689 aaPredicted RBP11.87□□□□□ -0.51
LSM2-212ENST00000477182 SCAMP3O14828 347 aaKnown RBP11.87□□□□□ -0.51
LSM2-212ENST00000477182 SLC2A3P11169 496 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 C6P13671 934 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 CORO1AP31146 461 aaKnown RBP11.87□□□□□ -0.51
LSM2-212ENST00000477182 DNA2P51530 1060 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 RTP5Q14D33 572 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 SMTNL2Q2TAL5 461 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 ATP13A4Q4VNC1 1196 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 BRMS1LQ5PSV4 323 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 MEI1Q5TIA1 1274 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 NYAP1Q6ZVC0 841 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 METTL3Q86U44 580 aaKnown RBP11.87□□□□□ -0.51
LSM2-212ENST00000477182 RHOT1Q8IXI2 618 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 CHPFQ8IZ52 775 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 HSPH1Q92598 858 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 KRT35Q92764 455 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 FGF11Q92914 225 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 OTUB2Q96DC9 234 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 SNRNP25Q9BV90 132 aaKnown RBP11.87□□□□□ -0.51
LSM2-212ENST00000477182 MAGEB5Q9BZ81 275 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 ANLNQ9NQW6 1124 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 KLHL11Q9NVR0 708 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.87□□□□□ -0.51
LSM2-212ENST00000477182 ARHGEF38Q9NXL2 777 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 XPO7Q9UIA9 1087 aaKnown RBP11.87□□□□□ -0.51
LSM2-212ENST00000477182 FZD10Q9ULW2 581 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 AP4E1Q9UPM8 1137 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 BTBD3Q9Y2F9 522 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 PCDHGA1Q9Y5H4 931 aa11.87□□□□□ -0.51
LSM2-212ENST00000477182 ESPNB1AK53 854 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 ENC1O14682 589 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 PSTPIP1O43586 416 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 PAGE1O75459 146 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 KLKB1P03952 638 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 RARAP10276 462 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 CTNNA2P26232 953 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 CTNNA1P35221 906 aaKnown RBP11.86□□□□□ -0.51
LSM2-212ENST00000477182 ADRA1BP35368 520 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 WASP42768 502 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 HARS2P49590 506 aaKnown RBP11.86□□□□□ -0.51
LSM2-212ENST00000477182 CSRP3P50461 194 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 ETF1P62495 437 aaKnown RBP11.86□□□□□ -0.51
LSM2-212ENST00000477182 TLE3Q04726 772 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 RPS6KA1Q15418 735 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 CA9Q16790 459 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 ARL13BQ3SXY8 428 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 EFHC2Q5JST6 749 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 KCNT1Q5JUK3 1230 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 LY6G5CQ5SRR4 150 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 ZFYVE27Q5T4F4 411 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 ERMARDQ5T6L9 678 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 LRRC38Q5VT99 294 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 NUGGCQ68CJ6 796 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 KIAA1324Q6UXG2 1013 aaKnown RBP11.86□□□□□ -0.51
LSM2-212ENST00000477182 DENND1CQ8IV53 801 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 UNC45BQ8IWX7 931 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 ETFBKMTQ8IXQ9 262 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 ATP6V0D2Q8N8Y2 350 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 TERB1Q8NA31 727 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 TEKT4Q8WW24 435 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 NTAN1Q96AB6 310 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 TOE1Q96GM8 510 aaKnown RBP11.86□□□□□ -0.51
LSM2-212ENST00000477182 HES6Q96HZ4 224 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 MRGPRX1Q96LB2 322 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 GABRG3Q99928 467 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 TLR10Q9BXR5 811 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 DHX35Q9H5Z1 703 aaKnown RBP11.86□□□□□ -0.51
LSM2-212ENST00000477182 CD248Q9HCU0 757 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 TMEM51Q9NW97 253 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 FTSJ1Q9UET6 329 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 SLC12A6Q9UHW9 1150 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 SH3BP1Q9Y3L3 701 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 JRKLQ9Y4A0 524 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 SNX10Q9Y5X0 201 aa11.86□□□□□ -0.51
LSM2-212ENST00000477182 CCDC66A2RUB6 948 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 MIF4GDA9UHW6 222 aaKnown RBP11.85□□□□□ -0.51
LSM2-212ENST00000477182 FANCGO15287 622 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 DDX3YO15523 660 aaKnown RBP11.85□□□□□ -0.51
LSM2-212ENST00000477182 HOXC11O43248 304 aaPredicted RBP11.85□□□□□ -0.51
LSM2-212ENST00000477182 SLC28A2O43868 658 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 PCDHGA12O60330 932 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 GREM1O60565 184 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 TULP3O75386 442 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 KRT1P04264 644 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 ATP1A1P05023 1023 aaKnown RBP11.85□□□□□ -0.51
LSM2-212ENST00000477182 KRT7P08729 469 aa11.85□□□□□ -0.51
LSM2-212ENST00000477182 C1SP09871 688 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms